| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3015 |
|---|
| Symbol | |
|---|
| ID | 4244899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4663054 |
|---|
| End bp | 4664826 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638108050 |
|---|
| Product | single-stranded nucleic acid binding R3H |
|---|
| Protein accession | YP_722643 |
|---|
| Protein GI | 113476582 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3854] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0100908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATTA CAGACGACCT TTATAGACTA TTAGAAATTG TGCCTGATAA AATCAGACGG
CCTTTACAGG AGCATCAAGA GCGAAATCAT CTGATTGAAA TTGTGATGGA TTTGGGTCGT
CTCCCAGAGG CTCGTTTTCC ATCCCATGTA GAATATTTGG CGGAAATTCC TGTCTCAAGA
AAAGACTTGA GTTATTCTAT GGAACGAATT GGTACTTTTA GCAGCGATAA TCGGGCAGGT
ATTGAACAGA CGCTACATCG GATTAGTGCT ATGCGCAATC GCACTGGAGA AGTTATTGGT
TTAACTTGCC GAGTGGGGCG GGCGGTTTTT GGCACAATTG CTATGATTCG TGAATTAGTG
GAAACGGGAA GATCAATTTT AATGCTTGGT CGCCCCGGTG TAGGAAAAAC AACGGCGCTA
CGAGAAATTG CAAGGGTGCT TGCTGATGAA TTAGAAAAAC GGGTCGTAAT TATTGATACT
TCTAATGAAA TTGCTGGAGA TGGAGATGTT CCTCACTCTG CTATTGGTCG AGCCCGTCGG
ATGCAGGTTG CTAGTCCAGA ACAACAGCAT CGCGTAATGA TTGAGGCGGT GGAAAATCAT
ACACCAGAGG TGATTGTGAT TGATGAAATT GGCACAGAAT TGGAAGCTCT GGCAGCAAGA
ACAATTGCAG AACGTGGTGT GCAGTTGGTG GGTACTGCTC ATGGAAATCA GATTGAAAAT
TTGGTAAAAA ATCCCACTTT ATCTGATTTA ATCGGGGGTA TTCAAGCTGT AACTTTGGGA
GATGATGAGG CTCGACGGCG GAGTTCTCAA AAGACTGTTT TGGAACGTAA AGCACCGCCA
ACTTTTGAAA TTGCTGTGGA GATGTTAGAA AGGCATCGTT GGGTGGTTCA CGAGCAGGTA
GCTGATACTG TTGATGCTTT GCTGCGTGGG AAAAAACCTA ATCCAGAGGT GAGAACTATG
GATGATAATG GTGAGGTAAA AATTAAGCGA GAGTTTAATA GTTCCCCTGG ATTTGGCTCG
GGAGTTAATC GCAATGCAGG GAGATTACTC GAACAGTCGG GTGAGATGTT GATTTCGGGT
GGTAGTTTTC GGGACTCTGG TTATATGATG CCGTTATCAA ATACGGGTAA AATTAGTCAG
CCTTTGGAGT TTTCTGAGGC CAAATCTTTT GAACAGTTGT TGGATGAGTC TTTGTCTGGT
AATGGGATGT TTTCTCATGA TACTGGAGAT CGTTGGGATA ATAAAGATGC AGGGCCGAAT
GGTGAGGATT TACCTTTGCA TATCTATCCT TATGCTATTC CACGGCATCA AATGGAGCAG
GTGATTACTA CTTTAGGTTT ACCTGTGGTT TTGACTAAGG ATATTGATAG TGCGGATGTG
GTTTTGGCTT TGCGATCACA TACCCGGAAA CAATCTAAGT TACGTCATGC AGCTAAAACT
CGTCATGTGC CTATTCATGT GATTAAAAAT AGCGGTTTGC CTCAAATTGC TAAGGCGTTG
CGACGTTTAT TAGATATGGA AGATCCTGCT ACTCCTGAGT TTGCTGATTT AAATTTGTTT
GCTGCTTCAG CTTCAGAAGA TGAGATGGAG GCGTTGGAGG AAACACGATT AGCGGTAGAG
CAAATTGTGA TTCCTAATGG GCAACCTGTT GAACTTTTGC CTCGGTCTCC GAAAGTGCGT
AAAATGCAGC ATGAGTTGGT TGAGCATTAT CGTTTGAAGT CTGCTAGTTT TGGAGATGAA
CCTAACCGGC GTTTGCGTAT TTATCCAGCT TGA
|
|---|
| Protein sequence | MHITDDLYRL LEIVPDKIRR PLQEHQERNH LIEIVMDLGR LPEARFPSHV EYLAEIPVSR
KDLSYSMERI GTFSSDNRAG IEQTLHRISA MRNRTGEVIG LTCRVGRAVF GTIAMIRELV
ETGRSILMLG RPGVGKTTAL REIARVLADE LEKRVVIIDT SNEIAGDGDV PHSAIGRARR
MQVASPEQQH RVMIEAVENH TPEVIVIDEI GTELEALAAR TIAERGVQLV GTAHGNQIEN
LVKNPTLSDL IGGIQAVTLG DDEARRRSSQ KTVLERKAPP TFEIAVEMLE RHRWVVHEQV
ADTVDALLRG KKPNPEVRTM DDNGEVKIKR EFNSSPGFGS GVNRNAGRLL EQSGEMLISG
GSFRDSGYMM PLSNTGKISQ PLEFSEAKSF EQLLDESLSG NGMFSHDTGD RWDNKDAGPN
GEDLPLHIYP YAIPRHQMEQ VITTLGLPVV LTKDIDSADV VLALRSHTRK QSKLRHAAKT
RHVPIHVIKN SGLPQIAKAL RRLLDMEDPA TPEFADLNLF AASASEDEME ALEETRLAVE
QIVIPNGQPV ELLPRSPKVR KMQHELVEHY RLKSASFGDE PNRRLRIYPA
|
|---|
| |