Gene Tery_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3001 
SymbolrplX 
ID4244885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4652647 
End bp4653015 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content34% 
IMG OID638108036 
Product50S ribosomal protein L24 
Protein accessionYP_722629 
Protein GI113476568 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.445857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00605598 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAGAA AGAAAAAACC CTTAATGAGT GCCAGAGGAA AACCTATACG CTATAAAGTT 
CACGTTAAGA AAGGTGACAC AGTTCAAATA ATTGCTGGAA AAGATAAAGG TAAAGTAGGT
GAAGTGCTTA AGGTATTACC GAAGGTTAGC AAAGTTATAG TTAAAGATGT TAATATTATA
ACAAAGCATG TTAAGCCTCA GCAAGAAGGA GAATCAGGTA AAATTGTTAC TACAGAAGCT
CCTATTCACA GCTCTAACGT GATGCTTTAT TCTACTAAAC AAAAAGTAGC TAGTCGCATT
TGTTATACAT TTACAGATGA TGGACGTAAA GTGCGAATGC TAAAAAAAAC AGGAGAGGTT
ATAGATTAA
 
Protein sequence
MSRKKKPLMS ARGKPIRYKV HVKKGDTVQI IAGKDKGKVG EVLKVLPKVS KVIVKDVNII 
TKHVKPQQEG ESGKIVTTEA PIHSSNVMLY STKQKVASRI CYTFTDDGRK VRMLKKTGEV
ID