Gene Tery_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2982 
SymbolprfA 
ID4245098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4637845 
End bp4638954 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content40% 
IMG OID638108017 
Productpeptide chain release factor 1 
Protein accessionYP_722610 
Protein GI113476549 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.51398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CATATTTATT AGATAAGTTA AAATCTGTAG AGCAAACATA TAATGAATTA 
ACTCTGCGTT TGGCCGATCC AGATGTTGCT AAAGACCCCA GTGAGTTCCA AAAATTAGCT
AAAGCACGTT CTTCCCTGGA AGAAGTTGTA AATTGTTATG TAGAGTGGAA AAATGCTCAA
GAAGAATTAG CTGATGCTAA GGAAATATTG AAAGAAGCTG TTGGCGATTT GGAAATGCAA
GAGATGGCCA AAGTTGAAGT AGAAGATTTG GAAGCCAAAC TAGAATCTCT AGAAAATCAA
ATGAAAATTG CTCTACTGCC ACGAGACCCC AACGATGATA AGAATATTAT GTTGGAGATT
AGAGCTGGTA CAGGAGGAGA TGAAGCTAGT ATTTGGGCAG GAGATCTCGT TAGAATGTAC
TCCCGCTACT CAGAGAACCA AAGCTGGAAG GTGAGCTTGC TGAGTGAATC TTTAGCAGAT
ATGGGCGGTT TTAAAGAAGC AATTTTAGAA ATTAAAGGGG ATCACGTTTA TAGTAAGCTC
AAATTTGAAG CAGGAGTTCA TCGGGTTCAA AGAGTGCCAG TTACAGAAGC AGGTGGAAGA
GTACATACTT CTACTGCTAC AGTGGCGATA ATGCCAGAGG TGGATGATGT GGAAGTTGAA
ATAGACCAAA AGGATATTGA ATTGTCAACT GCTCGTTCTG GTGGAGCTGG TGGACAAAAT
GTCAACAAGG TTGAAACTGC TGTAGATTTG TTTCACAAGC CTACGGGAAT TAGAATTTTT
TGTACCCAGG AGCGGAGCCA GCTACAAAAC AGGGAGCGAG CAATGCAGAT TTTGCGGGCT
AAACTTTATG AGATTAAGTT ACAAGAGCAA CAAGCAGAAG TGAGTTCTAT AAGGCGATCG
CAAGTAGGTA CTGGTTCCCG TTCTGAAAAA ATTCGTACTT ATAATTATAA AGATAATCGG
GTGACAGATC ATCGCTTAAA TCAGAACTTT TCTCTTGTAC CTCTTTTGGA GGGAGATATA
GAAAATGTTA TTCAAGCTTG TATTACCCAA GATCAACAGG AGCGTTTACA AGAGTTAGCA
GCATCTAGTT CTACTCCTAT TTCAGTATAG
 
Protein sequence
MAETYLLDKL KSVEQTYNEL TLRLADPDVA KDPSEFQKLA KARSSLEEVV NCYVEWKNAQ 
EELADAKEIL KEAVGDLEMQ EMAKVEVEDL EAKLESLENQ MKIALLPRDP NDDKNIMLEI
RAGTGGDEAS IWAGDLVRMY SRYSENQSWK VSLLSESLAD MGGFKEAILE IKGDHVYSKL
KFEAGVHRVQ RVPVTEAGGR VHTSTATVAI MPEVDDVEVE IDQKDIELST ARSGGAGGQN
VNKVETAVDL FHKPTGIRIF CTQERSQLQN RERAMQILRA KLYEIKLQEQ QAEVSSIRRS
QVGTGSRSEK IRTYNYKDNR VTDHRLNQNF SLVPLLEGDI ENVIQACITQ DQQERLQELA
ASSSTPISV