Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2982 |
Symbol | prfA |
ID | 4245098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4637845 |
End bp | 4638954 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638108017 |
Product | peptide chain release factor 1 |
Protein accession | YP_722610 |
Protein GI | 113476549 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.51398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA CATATTTATT AGATAAGTTA AAATCTGTAG AGCAAACATA TAATGAATTA ACTCTGCGTT TGGCCGATCC AGATGTTGCT AAAGACCCCA GTGAGTTCCA AAAATTAGCT AAAGCACGTT CTTCCCTGGA AGAAGTTGTA AATTGTTATG TAGAGTGGAA AAATGCTCAA GAAGAATTAG CTGATGCTAA GGAAATATTG AAAGAAGCTG TTGGCGATTT GGAAATGCAA GAGATGGCCA AAGTTGAAGT AGAAGATTTG GAAGCCAAAC TAGAATCTCT AGAAAATCAA ATGAAAATTG CTCTACTGCC ACGAGACCCC AACGATGATA AGAATATTAT GTTGGAGATT AGAGCTGGTA CAGGAGGAGA TGAAGCTAGT ATTTGGGCAG GAGATCTCGT TAGAATGTAC TCCCGCTACT CAGAGAACCA AAGCTGGAAG GTGAGCTTGC TGAGTGAATC TTTAGCAGAT ATGGGCGGTT TTAAAGAAGC AATTTTAGAA ATTAAAGGGG ATCACGTTTA TAGTAAGCTC AAATTTGAAG CAGGAGTTCA TCGGGTTCAA AGAGTGCCAG TTACAGAAGC AGGTGGAAGA GTACATACTT CTACTGCTAC AGTGGCGATA ATGCCAGAGG TGGATGATGT GGAAGTTGAA ATAGACCAAA AGGATATTGA ATTGTCAACT GCTCGTTCTG GTGGAGCTGG TGGACAAAAT GTCAACAAGG TTGAAACTGC TGTAGATTTG TTTCACAAGC CTACGGGAAT TAGAATTTTT TGTACCCAGG AGCGGAGCCA GCTACAAAAC AGGGAGCGAG CAATGCAGAT TTTGCGGGCT AAACTTTATG AGATTAAGTT ACAAGAGCAA CAAGCAGAAG TGAGTTCTAT AAGGCGATCG CAAGTAGGTA CTGGTTCCCG TTCTGAAAAA ATTCGTACTT ATAATTATAA AGATAATCGG GTGACAGATC ATCGCTTAAA TCAGAACTTT TCTCTTGTAC CTCTTTTGGA GGGAGATATA GAAAATGTTA TTCAAGCTTG TATTACCCAA GATCAACAGG AGCGTTTACA AGAGTTAGCA GCATCTAGTT CTACTCCTAT TTCAGTATAG
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Protein sequence | MAETYLLDKL KSVEQTYNEL TLRLADPDVA KDPSEFQKLA KARSSLEEVV NCYVEWKNAQ EELADAKEIL KEAVGDLEMQ EMAKVEVEDL EAKLESLENQ MKIALLPRDP NDDKNIMLEI RAGTGGDEAS IWAGDLVRMY SRYSENQSWK VSLLSESLAD MGGFKEAILE IKGDHVYSKL KFEAGVHRVQ RVPVTEAGGR VHTSTATVAI MPEVDDVEVE IDQKDIELST ARSGGAGGQN VNKVETAVDL FHKPTGIRIF CTQERSQLQN RERAMQILRA KLYEIKLQEQ QAEVSSIRRS QVGTGSRSEK IRTYNYKDNR VTDHRLNQNF SLVPLLEGDI ENVIQACITQ DQQERLQELA ASSSTPISV
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