Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2959 |
Symbol | era |
ID | 4245301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4596040 |
End bp | 4596972 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638107996 |
Product | GTP-binding protein Era |
Protein accession | YP_722593 |
Protein GI | 113476532 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000390486 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0714001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGT CCACGAATAT AACTATTCCC GTAGCACCTG CGGGGTATAA ATCAGGGTTT GTTGGCATAA TAGGACGACC CAATGTTGGA AAATCTACTT TGATGAATCA ACTAGTGGGG CAAAAAGTTG CTATTACCTC CCCAGTTGCT CAAACTACTC GTAATCGTCT GCGTGGTATT TTGACTACAC AAGCAGCTCA GATAATTTTT GTTGATACCC CAGGTATTCA TAAGCCTCAG CACCAACTAG GAAAAGTATT AGTTCAAAAT GCTAAAGTAG CAATTCAATC TGTAGATTTA GTTTTGCTGA TAGTAGATGG ATCAGTAATA GCAGGTGGAG GCGATCGCTA TATTATAAAT TTACTGGATA AAATCCAAAC TCCTGTAATT TTAGGTATGA ATAAATTAGA CCTACAACCT CAAGATGCTT GGAAAATAGA AGCTAGTTAT TATCAATTAA TCCATCCTCA CCCCTGGCAA ATAATCAAAT TTTCTGCTGT CACAGGAGAA GGAGTAGAAA TACTACAAGA TTTATTGATT GAACAGATGG AAACTGGACC TTATTATTAT CCTCCTGATT TAGTAACAGA CCAAGCAGAA CGCTTTATTA TGGGGGAGCT GATCCGGGAG CAAATTTTAT TGTTGACTCG TGAGGAAGTA CCCCACTCAG TAGCGATTGC TATTGACAGA GTAGATGAAG AACCAACTAT TACTCGTATT CTTGCCACTA TTAATGTGGA ACGTTCATCT CAAAAAGGAA TTCTAATTGG TAAGGGTGGG AATATGTTAA AAGCTATTGG TAGTGCGGCA CGTCAACAAA TTCAAAAGTT AATTGCAGGT AAGGTGTATT TGGAGCTATT TGTAAGAGTA CAGTCTAAAT GGCGACAGTC TCGAATTCAG TTAGCTGAGT TAGGATATCA GGTTGAAGAA TGA
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Protein sequence | MELSTNITIP VAPAGYKSGF VGIIGRPNVG KSTLMNQLVG QKVAITSPVA QTTRNRLRGI LTTQAAQIIF VDTPGIHKPQ HQLGKVLVQN AKVAIQSVDL VLLIVDGSVI AGGGDRYIIN LLDKIQTPVI LGMNKLDLQP QDAWKIEASY YQLIHPHPWQ IIKFSAVTGE GVEILQDLLI EQMETGPYYY PPDLVTDQAE RFIMGELIRE QILLLTREEV PHSVAIAIDR VDEEPTITRI LATINVERSS QKGILIGKGG NMLKAIGSAA RQQIQKLIAG KVYLELFVRV QSKWRQSRIQ LAELGYQVEE
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