| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2742 |
|---|
| Symbol | |
|---|
| ID | 4244775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 4248054 |
|---|
| End bp | 4249226 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638107802 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_722399 |
|---|
| Protein GI | 113476338 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.890739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.21285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGCA GAATTTGGCA ATGGCTGAAA AGTTTATGGG GAAACTTTTT GGGGTTATTC
TCCCGACCTC AAATAAAACC AACAGACCCT AAACCACTCT CTGAGTCTCT CCCACCTTTA
ACAGATACAG ATTATGATTT TCTCTTTGGT CAACTATTAG AAGGTATTGC CCAAGGTTGG
TACCCTGAAA GAGTAAAGAA TTTTTTCGAT GACTTGGGGG AGCGAGGCAA AGCTGAATCT
TGGCTTGAAT GGCTACAACG TTTTGGAAAA AGATTATTAG CATCCCCCAA ACCTAATGAT
GAGTTAGCTC AGAGAATGGT TAGGTTTGCT CACTTGACTC AAACGCTTCC TTCTCTGCAT
ACTCTGGGAG ATCTGGCTAA TAATATTGGA ACTGAACTTT TAAGTCGGGA TAATAGTGGA
GCAATTTGGG AGTATGATGG GCCTGATTCT AATTTCTCCC CTCCTCCCCA AGCATCTTTA
GGAGAAAATC AAGAAAATGA AGATTTGGAA AATTTAGTAG TTAAGCTTCA GGAAAATCCT
AATTTATTAG CTACTGTTGC TCAACAATTG GGGATACAGA CAAGTGACCC AAGAGTAGTT
ATTCAGGCAA TGGTTAGTGA GCTTGGTGTG GGAGTGGAAA TTCAGCAGTC TGCCGAGCAA
AATTCGGAAA TATGGGCTAA GTTGGGTTTA GAGCAAGCAA AAGCTGGTGA TTTTGCGGGA
GCAGTTGATA GCTGGGAAAG TGCTTTGGTT TTGAAGCCTG ATTATCATCA AGTTTGGTAC
AATCGAGGTA AGGCATTAGT ACAGTTAGGA AGATATGAGT CGGCGATAAC CAGCCATGAC
AAGGCTTTAG AAATTAAGTC TGATGACTAT TTGGCTTGGA ATAACCGTGG GGAAGCTTTG
GGAAAATTGG AGAGATGGGA AGAGGCGATC ACTAGTTGTG ACAAAGCTTT AGAAATTAAT
TCTGATTATT ATTTGGCTTG GTACAATAAG GCTAATTTTT TGGTTAGTTT AGGAAATTTG
ACACAGGCAG TTAATTGTTA TGACAAAGCT TTAGAAATTA AGCCTAATTT TTATGACGGT
TGGTATGAGC GAGGGAATGT TTTCAAAGAT TTGGGTTTAA TGGCAGAGGC TTATGAAAGT
TGGGAAAAGG CAGGGGAAAT TCAACCAGAG TAA
|
|---|
| Protein sequence | MFRRIWQWLK SLWGNFLGLF SRPQIKPTDP KPLSESLPPL TDTDYDFLFG QLLEGIAQGW
YPERVKNFFD DLGERGKAES WLEWLQRFGK RLLASPKPND ELAQRMVRFA HLTQTLPSLH
TLGDLANNIG TELLSRDNSG AIWEYDGPDS NFSPPPQASL GENQENEDLE NLVVKLQENP
NLLATVAQQL GIQTSDPRVV IQAMVSELGV GVEIQQSAEQ NSEIWAKLGL EQAKAGDFAG
AVDSWESALV LKPDYHQVWY NRGKALVQLG RYESAITSHD KALEIKSDDY LAWNNRGEAL
GKLERWEEAI TSCDKALEIN SDYYLAWYNK ANFLVSLGNL TQAVNCYDKA LEIKPNFYDG
WYERGNVFKD LGLMAEAYES WEKAGEIQPE
|
|---|
| |