Gene Tery_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2706 
Symbol 
ID4244969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4186226 
End bp4186903 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content32% 
IMG OID638107769 
Productpentapeptide repeat-containing protein 
Protein accessionYP_722368 
Protein GI113476307 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.122087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TAGCAACTGT TACTTTTGTC ATTTCTTTCA TATACTTGAG TTTATCTGCG 
CCAATTATGG GAGCTAATTA TGAAGATGTT AATCATCTTT TAGAATATAA TTGGTGTGTA
TCATTCTTAT GGAAACAATG TGACCTAACC AGAGCAAATT TTCATGACAT TAATTTAAAG
AATGCTAATA TGTCGGGAGC TAATTTAACA GGGGTAAATT TCCAAGGTGC AGATTTAAAT
GGAGCTAACC TTTCCGGAGC TAATTTAACA GGAGCTAATT TAGAAAAAGC TAACTTATAT
AGAGCAGATA TCAACAGAGC AAATTTAACA AATACTAATT TAACTAGCAC TCGTTTATTA
GAAGCTGATT TAACTCTAGC AAATTTAAAT CATGCTAATT TAACTGATGC TAATTTGTTA
GAAGCAAGAC TCTGGGGAGC AAGTTTGGCA GGAGCTAATT TAAACAATGC TAGTCTTCAT
GGTACTAACT TAGAATATGC TAATCTTGCT GATTCTAATT TAAGTGGAGC GGACTTTCAT
AGTTTCTCTT TCAGAAGTTA TAAACAAGAA ACTAATTTAA GTAATGCTAA TTTGGAAGGT
GCAATTATTA CTAATACAGA TTTAAGTGGA GTAATTATGA GGGGAACTAT TATGCCTGAT
GGTTCAATTA ATGAGTAA
 
Protein sequence
MKFLATVTFV ISFIYLSLSA PIMGANYEDV NHLLEYNWCV SFLWKQCDLT RANFHDINLK 
NANMSGANLT GVNFQGADLN GANLSGANLT GANLEKANLY RADINRANLT NTNLTSTRLL
EADLTLANLN HANLTDANLL EARLWGASLA GANLNNASLH GTNLEYANLA DSNLSGADFH
SFSFRSYKQE TNLSNANLEG AIITNTDLSG VIMRGTIMPD GSINE