Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2691 |
Symbol | |
ID | 4245186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 4162778 |
End bp | 4164304 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638107754 |
Product | polysaccharide export protein |
Protein accession | YP_722353 |
Protein GI | 113476292 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.113552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00268462 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTAATG ACTATTATCG AAAGTTAATT TATTTATTTT TAGCAAACTT TTATTCTAGT ACTATAACCA TTACTTTAGC TGGATTAATT TTTCCCAAAA TTGCTTATGG GCAACTTCAA TTACCTAATA ATTCTCAACC AAATATTTCA CAAAATAATA ATAATATAAA ATATCCATCT ATAGGCTCTC CGCCTTTAGA TCCTAATTTC GACTCGGATC CAAATTTACG ACTCAGACGT TATTTGCTCG GACCTGGAGA TCAACTTTCA ATTCAAGTTC AAAGATTTCC TGATTTAAAT GTAACAATAG CTATAGGTCC TGAAGGTACA ATTCAAATGC CTCTGATCGG AACTGTGCTA TTGCAAAATT TAACTATATC AGAGGCGATC GCAAAAATTA CTTCTGGCCT CAGTCAATTT ATCATTGATG CAGAAGTATC AATATCTTTG GTTGTACAAC GTCCGGTCCG AGTCACTATA GCTGGAGAAA TTACAAGACC TGGTTATTAT CCAGTAGGAG GAAATTATCA AATTTCAGAT GCTCTCTCGG CAGCAGGTGG AACAACTTTT ACAGCAGACC TACGGAATAT AGAGGTGCGT CGGACTTTAG CTGATGGCTC TATAGTTAGT CAGATAGTAA ATATTTTAAC TCCACTACAG GAAGGTGGTC CTCCTCCTAA TTTACGCTTA GAAGATGGGG ATGTAGTCAT TATACCTTCT CTCAAGTCTA TTAAACCTGA AGAGAAAGAC AGAGAACTAC TCACTAACTA TAGTCAGGCA GGGGCTTTAA CTACTGGTAT TATTACTGTA AATGGAGAAG TGACTCGACC TGGTTATTAC CCTGCAAGTC AGGTATCTTC TGCTTTGTTC GCTGCTGGTG GCGCTTCTCT AACTGCGGAT CTGCGCAGAA TTTTAGTTCG GCGGACTTTA GGTGATGGTA GTGTGATCGA GGAAATAATT GATTTATATA CTCCTTTGCA AAATTCTACT GACTTGCCTA ATATTCCTTT AAAGGATGGG GATGCTATCA TTGTGCCTCC ACTAGAACCA GGATCAGATT TTGGTTATAA CCGGGAGTTA GTTGCTAAGT CAACTTTGAG TCAACAACAA ATTACTGTTC GTATTTTTAG TCATCCTAAT GATACTTTGG CTACTACTAA TCTTCCAAAT GGTAGCAAAT TAATAGATAT TCTCAATGGT ATAGCGGTAG ACTCAGCACA TTTGGAGGCA ATTAATTTAA TTAGATTTGA TAAGGAAAAA AGCAAAATAA TTAGGCGAGA ACTGAATGGT AAAAAAGCGA TATTTGGGGA TAGTTCTCAA AATATTTTAC TTCAGAATGA GGATATAGTT GTGATTGACC GTACTTGGAT TAATCAAATT AATTATTTAT TTGAAAAATA TACACTTCCT GTCAGAAGTT CCCTGGAATT GTTGCTGTTT TTCCGTTCTT TACAACAGGA TGCCTCTAAT TTATTTTTAG GTGGTGGTGG AAATAATCGT AGAAATAATA ATCGTAGAAG GAATTAA
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Protein sequence | MINDYYRKLI YLFLANFYSS TITITLAGLI FPKIAYGQLQ LPNNSQPNIS QNNNNIKYPS IGSPPLDPNF DSDPNLRLRR YLLGPGDQLS IQVQRFPDLN VTIAIGPEGT IQMPLIGTVL LQNLTISEAI AKITSGLSQF IIDAEVSISL VVQRPVRVTI AGEITRPGYY PVGGNYQISD ALSAAGGTTF TADLRNIEVR RTLADGSIVS QIVNILTPLQ EGGPPPNLRL EDGDVVIIPS LKSIKPEEKD RELLTNYSQA GALTTGIITV NGEVTRPGYY PASQVSSALF AAGGASLTAD LRRILVRRTL GDGSVIEEII DLYTPLQNST DLPNIPLKDG DAIIVPPLEP GSDFGYNREL VAKSTLSQQQ ITVRIFSHPN DTLATTNLPN GSKLIDILNG IAVDSAHLEA INLIRFDKEK SKIIRRELNG KKAIFGDSSQ NILLQNEDIV VIDRTWINQI NYLFEKYTLP VRSSLELLLF FRSLQQDASN LFLGGGGNNR RNNNRRRN
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