| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2671 |
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| Symbol | |
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| ID | 4245166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 4138435 |
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| End bp | 4140921 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638107737 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_722336 |
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| Protein GI | 113476275 |
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| COG category | [N] Cell motility
[S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.290452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.798665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TTATTGTTAC CTGTCTAATA GGAATAACAA CCCTGACTAC AACTGCCCTA
ATACTGCCGC TATTACCACA AAGCAGTTAT GCTCAAAGTT CAAACTCTCA GGCAGAAAAG
TTAGAGCAAC TAATAAAAAC AGCACAGCAA CAAATAGGGC AATACCAATA TCAGGAGTCT
ATAGAAACGC TTCAAGAAGC TTTAGCTATT GCTAGAAAAA TTAAAGACCG AAAATATGAG
GCAGTGGCTA ACCTTGGTCT TGGTTATGTT TACGACCAAA CAGGCCAACC CCAAAAGGCA
TTAGAATTCT ACGAAAAAGC TTTACCTATC TGGCAAGAAG TCGGCTATCG CTTTGGAGAA
GCTACTACTC TCAATAATAT TGGTGGAGTT TACTCTGACA TAGGTCAACC CCAAAAGGCG
TTAGAATTCT ACGAAAAAGC TTTACCTATC TCGCAAGAAG TGGGCGCTCG CTCACAAGAA
GCTACTACTC TCAATAATAT TGGTCTAGTT TACGATAATA TAGGTCAACC CCAAAAGGCA
TTAGAATACT ACGAAAAAGC TTTACCTATC TCGCAAGAAG TGGGCGCTCG CTCACAAGAA
GCTACTACTC TCAATAATAT TGGTCTAGTT TACAGCAGTA TAGGTCAACC CCAAAAGGCA
TTAGAATACT ACGAAAAAGC TTTACCTATC TCGCAAGAAA TGGGCGCTCA CTCACAAGAA
GCTACTACTC TCAATAATAT TGGTCTAGTT TACTCTAATA TAGGTCAACC CCAAAAGGCA
TTAGAATTCT TCGAAAAAGC TTTACCTATC TGGCAAGAAG TGGGCTATCG CTCACAAGAA
GCTACTACTC TGAATAATAT TGGTAACGTT TACAGCAGTA TAGGTCAACC CCAAAAGGCA
TTAGAATACT TACAGAAAGC TTTACCTATC ATGCAAGAAG TGGGCGCTCG CTCATTAGAA
TCTACTACTC TCAGTAGTAT TGGTAAAGTT TACCGAGATA GCAACCAACC AGAAAAAGCC
ATAGACCACT TGGAAAAGTC AGTAAAAATT ACCCTAGAAA TTCGTGGGGG TTTAAAAAAA
GAAAATCGCA AAACTTTTTT AAATTTCCAA TATAATAAGT GGACACCGAT CGCCCTGATC
GATCTTCTCA TCGACCAAAA CCAACCCGAA GCCGCTTGGA AATGGTATAA TCTAGCCACC
ACTTTCGACC TCGCCGACTA CACCCGCCTT ATTAAGGCCA AAGTCAAAAA CCCAGAAGCC
CAAAAACTGA TTAACCAATG GGAAGAAAAC TATCAAAAAT TGCAAGCTCT CTATAGCAAA
ATAGAAGATG GAACAACTAC CCAACTTTCC CAACAAATTA AGCAGTTACA AGCAGAAAAC
AACCAACTCG CAGAAAACGC TAGCCAGAAA TATCCAGAAG TTGCCGAGCT TTTTGAATTT
GAACCCAAAG ACATCGACAA ACTCAAAGCC AATATTCCAC CGGGCACCGT TGTTATTCAA
CCTGCTCTTT TAACTGGTCT GAAAAGTGTC CCCGATAGCA TAGCTATATT CCTCGTGACC
AGAGACCAAG CCACCCTCGT CAAAAAACTC CCCATAGATG CTAAAGAATT TGATAGCATC
CTCACCGAAT ATCGCAGCCA ACTAGAAAAA CCCAACGCCG ACAACTACGC CACTAACCAA
GAAAAACTCT ACGACTATCT CATCCGCCCC ATAGAAACAG AAATAGCCGC CTACTCCCCC
AAACGACTAG CCATCATCCC CACAGGAAAA TTGCGTTATA TTCCCTTTGA AACCCTATAT
GATAATCAAA CCGAGCAATA TTTAATAGCC AAATATCCCA TCCACTACCT GACCCGCATC
TCTGCCACCA GACAGGAGCC AAAAGAGCCG ACAAAGTCCC TGAAAGTATT GGCATTTGGA
AATCCCCAGC CCACAGAGAT CAACCTCCGC GGTGCAGAAG ATGAAGCGAA AATTATCGCG
GAAAACTTAT CAGGAAAATC CTTAACTCGA GAAAAAGCGA CCCTCAGCAG TTTTGAAAAC
GAATCTCCCG GTTTTCCCTT AGTGCATCTA GCTACCCACG GCTGCTTTCA AAAAGGTGGT
TGCCGTGAGC AGGGTTTAGA AGAAAATACT ATTTTGTTTG CCAACAATAA AACCTTTAAT
ATTGCCAATG CAGCACGTTT AGGATTAGAA AATACAGATT TAATCGCTTT GAGTGCATGC
CAAACAGCCA TGAAAGCGGA CTCCAACGGA GAAGAAATAG CAGGAGTTGC CTATTTATTT
GAGCGTGCAG GTGCGGATGC TGTCATAGCC AGTTTATGGA ATGCCGAGGA TGGAACAACA
AAGGATATTA TGGTGAAATT TTATGATAAT TTGAAACAAG GAATGACCAA GGTGGAAGCA
TTACGTCAGG CGAAATTAAG TTATGCTAGG TCAGATGTGA GTCCGTTTTA TTGGTCGCCT
TTTATTTTGA TAGGGGATGG AGAATAA
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| Protein sequence | MKRIIVTCLI GITTLTTTAL ILPLLPQSSY AQSSNSQAEK LEQLIKTAQQ QIGQYQYQES
IETLQEALAI ARKIKDRKYE AVANLGLGYV YDQTGQPQKA LEFYEKALPI WQEVGYRFGE
ATTLNNIGGV YSDIGQPQKA LEFYEKALPI SQEVGARSQE ATTLNNIGLV YDNIGQPQKA
LEYYEKALPI SQEVGARSQE ATTLNNIGLV YSSIGQPQKA LEYYEKALPI SQEMGAHSQE
ATTLNNIGLV YSNIGQPQKA LEFFEKALPI WQEVGYRSQE ATTLNNIGNV YSSIGQPQKA
LEYLQKALPI MQEVGARSLE STTLSSIGKV YRDSNQPEKA IDHLEKSVKI TLEIRGGLKK
ENRKTFLNFQ YNKWTPIALI DLLIDQNQPE AAWKWYNLAT TFDLADYTRL IKAKVKNPEA
QKLINQWEEN YQKLQALYSK IEDGTTTQLS QQIKQLQAEN NQLAENASQK YPEVAELFEF
EPKDIDKLKA NIPPGTVVIQ PALLTGLKSV PDSIAIFLVT RDQATLVKKL PIDAKEFDSI
LTEYRSQLEK PNADNYATNQ EKLYDYLIRP IETEIAAYSP KRLAIIPTGK LRYIPFETLY
DNQTEQYLIA KYPIHYLTRI SATRQEPKEP TKSLKVLAFG NPQPTEINLR GAEDEAKIIA
ENLSGKSLTR EKATLSSFEN ESPGFPLVHL ATHGCFQKGG CREQGLEENT ILFANNKTFN
IANAARLGLE NTDLIALSAC QTAMKADSNG EEIAGVAYLF ERAGADAVIA SLWNAEDGTT
KDIMVKFYDN LKQGMTKVEA LRQAKLSYAR SDVSPFYWSP FILIGDGE
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