Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2660 |
Symbol | glyA |
ID | 4245385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4122022 |
End bp | 4123299 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107727 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_722326 |
Protein GI | 113476265 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.727411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACG CTAACTTTCT CGCTGATACT GACCCCCTAG TAGCAGAAAT AATTCAAAAA GAATATGGAC GGCAACAAGA CCACCTAGAA TTAATTGCTA GTGAAAACTT TACCTCACCT GCAGTTATGG CAGCCCAAGG ATCCGTACTC ACCAACAAAT ATGCTGAAGG TCTCCCAAGT AAACGTTACT ATGGTGGCTG TGAATTTATA GACGAAGTCG AACAAATAGC TATAGATCGC GCCAAACAAT TATTTGGAGC TGCCCATGCA AATGTACAAC CCCATGCTGG GGCACAGGCC AACCTTGCCG TGTTTCTGAC CTTATTAAAA CCAGGAGACA CTATCATGGG TATGGACTTA TCCCATGGTG GACATTTAAC TCATGGTTCC CCAGTTAACA TTTCTGGTAA ATGGTTCAAA GCTCATCATT ATGGGGTAAA TAAAGAAACA GAAGCTATAG ACTATGACCA AGTTCTTGAG TTAGCAAAGA AGCATAAACC TAAACTACTG ATTTGTGGTT ACTCTGCCTA TTCTCAGATA ATTAATTTTG AAAAATTCCG GGCGATCGCT GATGAAGTAG GAGCTTATTT ATTAGCAGAC ATTGCTCATA TTGCTGGGTT AGTAGCAACA GGCCACCATC CTAACCCAGT CCCTCACTGT GACGTAGTAA CAACTACCAC CCACAAAACT TTAAGGGGAC CACGAGGCGG TCTCATCCTT ACTCGAGACT CAGAATTAGG GAAAAAACTA GACAAATCAG TATTTCCTGG AACTCAAGGT GGTCCTTTAG AACATGTTAT TGCAGCTAAA GCAGTCGCAT TTGGAGAAGC TTTAAAACCA GAATTCAAAA CTTATTCCGG CCAAGTTATA GAAAATGCTG CGGCCTTAGC AACCCAACTA CAAGAACGGA AATTGAAAAT AGTTTCTGGT GGTACGGAAA ATCACGTTAT GCTAGTGGAT CTAAGATCAG TAAGTATGAC AGGTAAAAAA GCAGATAAAT TGATGAGTGG GGTAAATATT ACTGCTAATA AAAATACTGT ACCTTTTGAC CCAGAGTCTC CTTTTGTTAC CAGTGGTCTC CGACTGGGTT CTCCAGCAAT GACAAGTCGA GGTATGAAAG CTACTGAATT TATAGAAATA GGCGATATTA TAGCGGAAAG ATTACAAAAT CCAGAAGATG AAGGGATAGC TCAAAAGTGT CGAGAGAGGG TAGCATCATT ATGCAAAGCT TTTCCTCTTT ACCCTCATAT GATGGCTAAA GTTCCTAGTC TAGTTTAA
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Protein sequence | MINANFLADT DPLVAEIIQK EYGRQQDHLE LIASENFTSP AVMAAQGSVL TNKYAEGLPS KRYYGGCEFI DEVEQIAIDR AKQLFGAAHA NVQPHAGAQA NLAVFLTLLK PGDTIMGMDL SHGGHLTHGS PVNISGKWFK AHHYGVNKET EAIDYDQVLE LAKKHKPKLL ICGYSAYSQI INFEKFRAIA DEVGAYLLAD IAHIAGLVAT GHHPNPVPHC DVVTTTTHKT LRGPRGGLIL TRDSELGKKL DKSVFPGTQG GPLEHVIAAK AVAFGEALKP EFKTYSGQVI ENAAALATQL QERKLKIVSG GTENHVMLVD LRSVSMTGKK ADKLMSGVNI TANKNTVPFD PESPFVTSGL RLGSPAMTSR GMKATEFIEI GDIIAERLQN PEDEGIAQKC RERVASLCKA FPLYPHMMAK VPSLV
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