Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2588 |
Symbol | |
ID | 4244656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3989526 |
End bp | 3990599 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638107659 |
Product | hypothetical protein |
Protein accession | YP_722258 |
Protein GI | 113476197 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00416674 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.988623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTGA ACCCTAGTAT TCATCAACAA ATCCACGATT TAGAATTGGC TATGGAACAG TTAGAATTAC AGAAAGAAGC CATTGCATTT GCTAAGAAAA TTGATAATGA AGTAGGTAAG ATAACTGAGC GTTTAGAAGA GATATTTAAG CAGTTTCCTG ACTATAAAAA TATAGTTTCA AAGAGGTTAA GGTTTGGTGA AGTAATTATA GATGAGGATT TAAGTATTGA GGATATCAAT GACGTTGATG CAGAATTTTA CAGTAGTGAG GTTATTGAAG TAAAAGAGAT AGAAAAAACT ATAGAGACAT CTGCAACAGA TACATTACAA CTAGGTGATT TGGTTGAAAA TAATTCAAAT GGAGAGAGAC TTTATGTGTT GAGTTTAGAT TGTAATCATA AGAAAAGAAA TCCTTATTAT ATAGTCTGCG ATGAGAATAG GATATTCAAG ATAAAAGAAA AAAATGTATT ATTCTTGGCT CAATCTAATG ATGAAAAAAT AGCCTATGTT TATAGTTGCG TAAAAAATCT ACTCTTAAAA GCAACAGATA ACTACAACTT AAGTCTTGTT TTAAATAATT TGACTGATGA GATTCAAACA TCTGTATGGA AAACACTTAC TATAGAGGAA AAAAATCACA TTGAGTGCGT TCGCGCTTGT CCTAAACTAC TTCCTGGAAC TTCACTCAGA GAGGTGGGGG TATTAGGAAG TAAAGTTTTA TATGTTGGTC ATAATGAAAA TAAGAAGAAA GAAGCTTATT ACATTGGCTA TTATCTGAAT GGAGAGCATG TAGCAAAAGA TAAGAGAGTT GTATTAATAG ATGGAGATTT TAAGCCTACT GTTTGTGATC AGAAATATAT TAAACCGTTG ATGAAGCCTC AACCTGATGA GTTTGATAAA GTACATCAGG AAATGTTGAT AGAATTAAAG TCATGGATGG AACCGTCGAT ATATGGTTTC AAGCCTTTAG TTGAATCTGA TGATATTGTT AATGATAAGC ATAACCAGAG GTCTCCTATA TTATTAAAGT CCTTGGAAAT TAGGATGAAA AAATGGCTAA AATTTCTTGG GTAG
|
Protein sequence | MFLNPSIHQQ IHDLELAMEQ LELQKEAIAF AKKIDNEVGK ITERLEEIFK QFPDYKNIVS KRLRFGEVII DEDLSIEDIN DVDAEFYSSE VIEVKEIEKT IETSATDTLQ LGDLVENNSN GERLYVLSLD CNHKKRNPYY IVCDENRIFK IKEKNVLFLA QSNDEKIAYV YSCVKNLLLK ATDNYNLSLV LNNLTDEIQT SVWKTLTIEE KNHIECVRAC PKLLPGTSLR EVGVLGSKVL YVGHNENKKK EAYYIGYYLN GEHVAKDKRV VLIDGDFKPT VCDQKYIKPL MKPQPDEFDK VHQEMLIELK SWMEPSIYGF KPLVESDDIV NDKHNQRSPI LLKSLEIRMK KWLKFLG
|
| |