| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2554 |
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| Symbol | |
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| ID | 4244856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3938984 |
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| End bp | 3943945 |
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| Gene Length | 4962 bp |
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| Protein Length | 1653 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638107629 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_722228 |
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| Protein GI | 113476167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.237962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATAT TTCAAACTAA CCCATCCAAC CTTCACCAAT TACTCCAAAT GGTAAAAGAT
GGAGATGAAC TTAACCTACA AGCAGGAGAT TATAAAGCAC CTTTTACCAT AGATAAATCA
ATTACCATTC GTGGTAGTGG TAGCGATACC GTGATTTTTG CTGCAACCGA AACCCCACTA
ATAATTACAG CTTCAAAAGT ACGAGTGGAA AATTTAACAG TAGAGCGAAC AGTTGGTGGT
GACAATGGGG AAGTTGCTAT ATTTGCTGAA GCTAATACTA ACCCCATTTT GAGTCAGGTG
AAATTAAATG GTGTTGCAGA AAATGTAGAA TGGTCAGGAG TAAGTTGGAA TATCCCCACA
ATTCTCGACT TTGGGGAAAT AGAAATAAAC CGACTGGTAG AACGTGAGTG GGAGTTAGAA
CTAGGTTCAG CTTGTCAGGT TTTGTGCGAT CTTAATTGGT TACAAGTGCG CTCCAGTTAT
CTCTCACCGG GGCGACAAAA TTTACAGGTT GTCCTGAATA CTGCCAATAT CCCTACTGGT
ACAAATTTAT CTGGCTTGAT TTTTCTGTCA GCAGCAGATA GTAGACGGGA ATTAGAAGTT
ACTGCCAAAG TTATTTCCCC CCTTCCAGTA ACTCCAGTTT TAGCAGCTTC CACAAAAGCT
TTGCCAGCTA AAGTTTTGAA CTCTCAAGAT TGGGGTTATC GGTTTTCTGG TAGTGCCGCA
GATAAATTGG TTCGCGCTCA GTTGGGTGAG GCAGCTCTGA AAAAATATCC AGAATTTCCC
CAACGTCGAG CCAAAGCAGA AGCATTGATG TCTGAAATAT TGGATGGAAA TTCTCATCTA
TATTATGTGC GCCGTCAAGC GCCGGGAAGA GAAGAAGGAG AGGAAATTTG GGAACTGACT
ATGGCGACTG ACAGGGAGGA GCAAGAGTGG GAAAAAACTT TGAAACTTCG CGGAGCAGTA
AATATTGATG AAGACAGAGT TTTAAAATTA TTATCGGTGC AGTTAATTTC TCAAAAAGCA
GAAAAAGATG AATTTAGTTT AGCTTTGCAA ATTCGTTTAT TGCCACAACA TCAGTATCGA
CGAGGGATAC CATTGGGAGT AGTGCGCTCT ATGGGTAAAA TGCCTTTTTT TGGAGACCGT
ATACCTACAG AGGAGCAACT ACCTATTTGG ACGACTTTTG TAGAAATAGA GCAACGTATA
GCAGAAAAAC GTCAGTTTTG CCTACAGTTT CTGAGTCATA ACTATGGTAG TGCAGGGAGA
AAGATTACTT TTGAAATTGA TGTTTCTTCC GCAACCATTG ATGGTACCGC AGAAAGTGCT
ATAGACGATC TTGAGTTACG GCGACGACTA TTTGAGGCTA AGAACGAAGA TATTCAGCTT
TTTCAAACTT CTCCTGCAGG TGGTGATGCT AGAGATGGAG AAAAGTTGGG AGCGATCGCT
ACTATTGACT GGAAAAAAGG TCAAGTAGGA GTAATGTTAG ATAGTGAAAT TGTGGAAATT
ATTAGTCGTG GGAGTTATAG AATACCATCC ACAGGATTTC TATTTTTTAT AGCTTCTGGG
GATATAGCTC AAGTGAAACG CAAACGCAGA GCTCTAGAAG ATTTACAAAG TGGTCGTTGT
CAGAATCCAT ATTTGGGAGA TTTTTTCTTT GATGCTACCT GTGCGCGAGC TCCGAAGCAG
GTAGTTAAAC TGCAACCCCA GGATTTATTG TTACCTGCTG CGAATGTTAA TCAAATTGCT
GCTGTGGAAA CAGTTTTAGC TAGTCCAGAT TTGGCTTTAA TTCAAGGACC ACCTGGCACA
GGGAAAACTA CTGTTATTGC TGAAATATGT TATCAAGTTG CTTTGCGTGG GGGACGAACT
TTGATTGCAT CTCAGGCAAA TTTAGCAGTT GATAATGCTT TGAGTAGATT AGTTCATAAC
CCGGTTATTC GTGCTGTGCG TAAGGGAAAA GCAGAAAAGG TGCAGGAAGA AGGGGAGCCA
TTTTTGGAAC ACCGAGTCAT TGATACTTGG TTGAAAAATA CTGCAAACGA CTGTGAAAGT
GATTTGGATG AGCGGCTACA ACGGGTAGAA ATTTTACGGA ATTTATTGAT AGAGTCAGAG
AGGTTTAATG CTTATGTGGA GTTAGAGGAA GTATGGGTAA GTCAGCAGCA AGAGTTGAGC
GATCGCCAAA CTATTTTGGA AACAAGTCGG GAAGTTTTAG CAAGTGAAGT TTTGCAATTA
GAAACTGATA CAAAGGAATT AAATTTTCTG ATGTTGGGAT TAGATAATTT GTTAAATTCT
GCACCTAATG TTAATTGGCA AGACGAGGAA GTTAAAAGTT TATTACCCCG TTTACAACCT
TATTCTCAGG AGGAAAAATC AGTCAAAGAT TTAGTAGAGA ATGTGCGTTT AGCTCGAAAT
ATTTCCAGAG ATATTGGTTG GGAAATTCCA GCATTAGGAG CTTTTGGTTT AGCAACTTGG
TTTCAAGAAA ATTTAGCTAT TTTATTGCCA GAATTTTACA ATGGGTTAGC TGTAGCAAAA
AAAGTAACTC TGATGATGTC AGAACTAGAA AATTTACAGC AGATATATCA ACAGAGTCAT
AGTAAGTTTG AGCAGCTCAA AAAAGATATT GATAACCAAG ATATAGTTTC GGAAAATCTA
CAAAAAAATC GCCAAGAATT AGAATCACAA AAAAGTCAAA TAGATTTAGT TGTTTCAGAA
GTAGGTGCTT GGATAAATAT TGGTAAAAAC CGTATATTTG AGGAATTAAA AAAATGTTGG
GAGACTGATC AAGATTTCCA ATTAGATTTA ATTGGGCTAC CAGAAAGTTT GATTAAACTT
GTTAATAGGA AAAAATTACA ACTTTTGCCA GAATATGCTC AACCTCTTCA TAGTTTGCCA
GATTGGGAAA GAGTGGAAAA AGCATTAAAC GCAGAGTCAA ATCGTGGCTT TCAAAATATC
CGAGGCCGAG AACATCGTTT TGATAATTTT TTGCAAATTA TTCTAAGTAA ACCACCAATA
GTTTTGTCAG AAAGAGATTA TCAAAAGTGG CAAGAATACG CTATATATTT TGAACGTTAT
TCGCAACTTA ACCAAACAAG CCGACAAGGT TTAGTAGAAA AAATCCAACA TTTTTTTGAT
GAAAATAGGA GCAAATATAG TCTGGTATGG AAAGCAGATA ATATGTTAAA TACTTTGGCA
GAAGTAACAG ATAAGATATC CAATAAAATT CTCCATCATT CTCGTGAAAT GTTACTTCCT
ATGAAACGAA GAAATCAAAA AGAAATACTA AAAAATAAGG AACATTTAGA AGAAATTAGT
GAATTACAGA AAAGCTACAA ACAAGAACGA GAAGTAGTTG AAGAAGAAGG AAAAAATTTA
CATCAAAAGC TCGAACAAAA ATATCAAGAG TTTATTAACA AATTAACAGG AATAGAGGTT
CAATTAGAGT TTAATCCAGA AATTCATAGT TTAGCTAAAA AGTATCTTGA ATCAACACCA
TTAGAAGTAT TAAATGATCA ATCAAATTTT GTAGCTAAAG TAAATTCTTG GGAAAATAAC
CTCAAGCAAC TTGAAAAAAT AGCCCCTTTA TTTGAGCCTT TTACCGTTCT TACAGATATT
AAAAATCTTC TCCAAAATAA ACTAAATACT GCTCAAGAAA AAGCAGATAA ATCTCAGGAA
GAACTCCAAT CTTCTGAAAC AGAAATTAAT CAAATTAAAA CAGCCTTACA ACAAGAACCA
TCAATAACCC TAATCGAAGA AAGAGACTGG TGGAAATCTG CATGGAAAAA AATCCCAGAA
AATATCAAAC CTAGGGTTTA TGAAACAGAA ATATTTGCCA TAGAAATTTT GCAGAAAATT
AAACTTCAAC TGCAAAACTG GCAACAAGAA TTAGACACAG AAAAAACATA TCTAAATAGC
CACCAGAAAT TTATCCAAGA CTGGATTGAA AAAATCAAAA AACCTTCAGA AAAAGATAGT
AACGATCTGA GAAAAATTTA TCTTGATAAT GCCAATGTTA TTGGTATTAC TTGCGTCCAA
GCTGCCAGTC GGAGTTTTGC TGAAGAATTT AATAGTTTTG ACGTAGTTAT AATTGATGAA
GTTAGTAAAT GTACTCCCCC AGAAATATTA ATTCCGGCAT TAAAAGGCAA AAAATTAGTA
TTAGTAGGAG ACCATCGCCA ATTACCACCA ATGCTCCATA ATAGTACTAT TGAAGAAATT
GCTGAAGAGA TGAAGAGTAC AAAAGAAGAA CTAAGCTTTT TAGAAGAGTC GCTATTTAAA
ACTCACTTTG ATACAGCAAC AGAAAAAATC AAGCAGATGT TAACTATTCA ATATCGAATG
CACCCGAATA TTATGGGAGC AATTAATCAG TTTTATCAAC ATCGTTTACA ATGTGGTATT
ATTCAACCAA ACGAAGAACG CGCTCACAAC TTAGGTGGTG AAATTCTGCA AGATAATAAA
CATATTATTT GGGTAAAAAT GCCACATTTA GAAAGTTTTA TTGAACAAAA AGAAGGAACA
TCACCTTTTA ATGAAAAAGA AGTTGATGTC ATTGAAAAAT TATGTGGTGA AATGGAGAAA
TCTTGGCGTA TTAAAATTGC GGAGGGCTTT CCCAGAAAAG AATTAGGAAT TATTACATTT
TATAATGCTC AGTTACGACT AATAGACTCA AGAATTAATC CAGAAAAATT TCCATCGCTG
CATATTAGAA CAGGTACAGT TGACAGATTT CAGGGTATGG AAAGACAAGT AATTATTGTG
AGTATGGTAA GAAATAATGA GGAGGGAAAA GTAGGGTTTG CTAAGAAGCC AGAACGGGTA
AATGTTGCTT TTTCTCGTGC TCAGGAATTG TTAGTTATTG TTGGGTGTCA TGGGTTATTT
ACTCAACATT ATGGAATGGT GGGAAATATG TACTCAGAAG TTTCTGATGT TGTGCGTCGT
CAAGGAGGGT TGATAGAATT TTCTGACATT TTGGGTGAAT AA
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| Protein sequence | MTIFQTNPSN LHQLLQMVKD GDELNLQAGD YKAPFTIDKS ITIRGSGSDT VIFAATETPL
IITASKVRVE NLTVERTVGG DNGEVAIFAE ANTNPILSQV KLNGVAENVE WSGVSWNIPT
ILDFGEIEIN RLVEREWELE LGSACQVLCD LNWLQVRSSY LSPGRQNLQV VLNTANIPTG
TNLSGLIFLS AADSRRELEV TAKVISPLPV TPVLAASTKA LPAKVLNSQD WGYRFSGSAA
DKLVRAQLGE AALKKYPEFP QRRAKAEALM SEILDGNSHL YYVRRQAPGR EEGEEIWELT
MATDREEQEW EKTLKLRGAV NIDEDRVLKL LSVQLISQKA EKDEFSLALQ IRLLPQHQYR
RGIPLGVVRS MGKMPFFGDR IPTEEQLPIW TTFVEIEQRI AEKRQFCLQF LSHNYGSAGR
KITFEIDVSS ATIDGTAESA IDDLELRRRL FEAKNEDIQL FQTSPAGGDA RDGEKLGAIA
TIDWKKGQVG VMLDSEIVEI ISRGSYRIPS TGFLFFIASG DIAQVKRKRR ALEDLQSGRC
QNPYLGDFFF DATCARAPKQ VVKLQPQDLL LPAANVNQIA AVETVLASPD LALIQGPPGT
GKTTVIAEIC YQVALRGGRT LIASQANLAV DNALSRLVHN PVIRAVRKGK AEKVQEEGEP
FLEHRVIDTW LKNTANDCES DLDERLQRVE ILRNLLIESE RFNAYVELEE VWVSQQQELS
DRQTILETSR EVLASEVLQL ETDTKELNFL MLGLDNLLNS APNVNWQDEE VKSLLPRLQP
YSQEEKSVKD LVENVRLARN ISRDIGWEIP ALGAFGLATW FQENLAILLP EFYNGLAVAK
KVTLMMSELE NLQQIYQQSH SKFEQLKKDI DNQDIVSENL QKNRQELESQ KSQIDLVVSE
VGAWINIGKN RIFEELKKCW ETDQDFQLDL IGLPESLIKL VNRKKLQLLP EYAQPLHSLP
DWERVEKALN AESNRGFQNI RGREHRFDNF LQIILSKPPI VLSERDYQKW QEYAIYFERY
SQLNQTSRQG LVEKIQHFFD ENRSKYSLVW KADNMLNTLA EVTDKISNKI LHHSREMLLP
MKRRNQKEIL KNKEHLEEIS ELQKSYKQER EVVEEEGKNL HQKLEQKYQE FINKLTGIEV
QLEFNPEIHS LAKKYLESTP LEVLNDQSNF VAKVNSWENN LKQLEKIAPL FEPFTVLTDI
KNLLQNKLNT AQEKADKSQE ELQSSETEIN QIKTALQQEP SITLIEERDW WKSAWKKIPE
NIKPRVYETE IFAIEILQKI KLQLQNWQQE LDTEKTYLNS HQKFIQDWIE KIKKPSEKDS
NDLRKIYLDN ANVIGITCVQ AASRSFAEEF NSFDVVIIDE VSKCTPPEIL IPALKGKKLV
LVGDHRQLPP MLHNSTIEEI AEEMKSTKEE LSFLEESLFK THFDTATEKI KQMLTIQYRM
HPNIMGAINQ FYQHRLQCGI IQPNEERAHN LGGEILQDNK HIIWVKMPHL ESFIEQKEGT
SPFNEKEVDV IEKLCGEMEK SWRIKIAEGF PRKELGIITF YNAQLRLIDS RINPEKFPSL
HIRTGTVDRF QGMERQVIIV SMVRNNEEGK VGFAKKPERV NVAFSRAQEL LVIVGCHGLF
TQHYGMVGNM YSEVSDVVRR QGGLIEFSDI LGE
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