| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2536 |
|---|
| Symbol | |
|---|
| ID | 4245070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 3914490 |
|---|
| End bp | 3914915 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638107612 |
|---|
| Product | SSU ribosomal protein S16P |
|---|
| Protein accession | YP_722211 |
|---|
| Protein GI | 113476150 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000571366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00236598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC TGCGATTAAA GCGATATGGA AAAAAACGGG AAAGTAGCTA CCGGATAGTA
GCAATGAACA GCGATTCTCG TCGTGATGGC CGTCCATTAG AAGAACTCGG CTTTTATAAT
CCTAGAACAG ATGAAACAAG ATTAGATGTG CCAGGAATTA CAAGACGCCT TGAACAAGGT
GCCCAGCCAA CAGATACAGT GCGTGACATA TTGAAAAAAG CTAATGTCCT TGAATTATCC
AGAACCGGAG TTAACACCCA AGCAAACGTA TCAGTTTCCC ATGCAGAATC GACCGAAGCC
ATTACCAATG CTGAACCGAT CCAAGCAACT GCCAATACTG AAAGCAACGA AGTCAGTGAC
AGTGAGTCAA CTGCAACAGC AACAATTAGG GAGTCTGAGG AACAACCGCC AATCAGTGAA
TCCTGA
|
|---|
| Protein sequence | MIKLRLKRYG KKRESSYRIV AMNSDSRRDG RPLEELGFYN PRTDETRLDV PGITRRLEQG
AQPTDTVRDI LKKANVLELS RTGVNTQANV SVSHAESTEA ITNAEPIQAT ANTESNEVSD
SESTATATIR ESEEQPPISE S
|
|---|
| |