Gene Tery_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2445 
Symbol 
ID4244629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3767797 
End bp3769512 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content43% 
IMG OID638107530 
ProductL-aspartate oxidase 
Protein accessionYP_722130 
Protein GI113476069 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.848837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAT TAAATTCTCC AAGTATTTTT CCTCACTTTG ACATTATAGT GGTAGGTTCA 
GGTGCTGCCG GACTTTATGC GGCTCTTTGT TTACCTGTTC ATCTCCGAGT CGCCTTGGTT
ACTAAAAATA CTATAAACAT GGGTTCAAGT AACTATGCTC AGGGAGGTAT TGCTGCTGCC
ATTGATCCTG CGGATAACCC CATCTTGCAT CTAGAAGATA CTCTCAAAGC AGGTGTAGGT
TTATGTGACC AGGAAGCAGT AAGGTTTATG GTGGACAATG CGGCCAGAGC GATCGCTCAT
TTAGTAGAAA TGGGAGTTGC CTTCGACCGC AAAGGAAAAA AACTGGCAAT GACTCTCGAA
GCTGCTCACT CTCATCCCCG GGTGCTTCAT TCAGCAGATA CCACAGGTAG AGCTATTATT
GATACACTCG TTATTGAAGC TCAAGAACGT CCAAATATTC AGATAATTTC CCAGGCAGTA
GCATTAAATT TGTGGTTAGC CACACAAAAG GCTCGGGTTC AAGGTATTAG TCTTCTTCAC
GAAGGTAAAA TCCAGTGGTT AAAATCCTCT GTAGTGGTTT TAGCAACAGG TGGAGGCGGT
CAAATATTTG CCCAAACTAC TAATCCTGAG GTGAGTACGG GGGATGGAAT TGCTATAGCG
TGGCGTGCCG GGGCAGTTTT GCGAGATTTG GAATTTTTCC AATTTCATCC TACTGCCTTA
ATTAAACCAG GAGCACCTCG TTTTCTCATT AGTGAAGCTG TTCGTGGAGA AGGAGCGCAC
CTAATAGACA ATAAGGGAAA CCGCTTTGCC TTTGAGTATC ATCCGGCTGG AGAGTTAGCT
CCTAGAGATG TTGTCAGTAG AGCTATTTTC CATCATTTGC ACAAAACTGC TACCAAGCCT
ACCAATGCTC ATGTTTATTT GGACTTGCGA GCCATTGACT CAGACCGCGT TCGCGACAGA
TTTCCCAATA TTATCAATGT CTGTCAAAAA TGGGGTATTG ATGTTTTTCA AGAACCTATT
CCGGTTGCTC CTGCTGCTCA TTATTGGATG GGTGGAGTGG CTTGCGATCT AATGAGTCAG
ACTTCAATTC CCGGACTATA TGCAATTGGG GAAACAGCAA GTACAGGAGT TCACGGAGCA
AATCGTTTAG CTAGCAATTC TTTGTTAGAA TGTTTAGTAT TTGCTTCTCA ACTATCTCAG
ATTGAAATTG AGCCAAATTT GGTGGCACCT GATGCTGATA TTTTTCAGGT AAGTTCTAAT
TGGAATATGG AAATGGAACA GATAGAGGCT ATCCGACAAA TGTTACCAAG TTTAATGTGG
GAAAGTGCAG GAATTTCTCG TAAAGGAGAG TCATTAAGTC AGGCACTATA TCAGGTGGCG
CGCTGGCGAG ATAGTTTAGC AAGTTTTGAG ATAGTTAAGT TTTTAGCTAA TCTCTTGCCT
AACCAGACGA TAAAATTAAA TTCGACTAAT GCTGAAGAGC AGTTGCGGAT AACAGCAGAA
ACACTCAATA TTTTAGACTT GGGTTATTTA ATTCTTAAAA GTGCTGCATG GCGAACTGAA
AGCAGAGGTG GGCATTATCG CAGTGATTAT CCAAAAACTT CTAATGATTG GAAACTACAT
ACTTTGGTTC AGGGCGATCG CTTATTAACT GGTTTTCCAA ATGCCTCGCC CCCTGGCCAA
GAGAGAGGGT CTTCAGTCAA CATTGAAAAA TTTTGA
 
Protein sequence
MPRLNSPSIF PHFDIIVVGS GAAGLYAALC LPVHLRVALV TKNTINMGSS NYAQGGIAAA 
IDPADNPILH LEDTLKAGVG LCDQEAVRFM VDNAARAIAH LVEMGVAFDR KGKKLAMTLE
AAHSHPRVLH SADTTGRAII DTLVIEAQER PNIQIISQAV ALNLWLATQK ARVQGISLLH
EGKIQWLKSS VVVLATGGGG QIFAQTTNPE VSTGDGIAIA WRAGAVLRDL EFFQFHPTAL
IKPGAPRFLI SEAVRGEGAH LIDNKGNRFA FEYHPAGELA PRDVVSRAIF HHLHKTATKP
TNAHVYLDLR AIDSDRVRDR FPNIINVCQK WGIDVFQEPI PVAPAAHYWM GGVACDLMSQ
TSIPGLYAIG ETASTGVHGA NRLASNSLLE CLVFASQLSQ IEIEPNLVAP DADIFQVSSN
WNMEMEQIEA IRQMLPSLMW ESAGISRKGE SLSQALYQVA RWRDSLASFE IVKFLANLLP
NQTIKLNSTN AEEQLRITAE TLNILDLGYL ILKSAAWRTE SRGGHYRSDY PKTSNDWKLH
TLVQGDRLLT GFPNASPPGQ ERGSSVNIEK F