| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_2377 |
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| Symbol | |
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| ID | 4245025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 3670590 |
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| End bp | 3672419 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638107470 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_722070 |
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| Protein GI | 113476009 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.40782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATAA ATTATCGAAC TGGAAAAGTC ATTACTTCAG AAAATAGAGG GAAATGGCAA
GGACTAATTA TTGGTATTGG CATTGGTGTA ATTGCTAGTT TAGTGAGTAT GCAAGTTTCT
AGACAAAAGC AAAAGACTGA AGCTAATACC ACTTCTACCC AAGCCATTAA AGGTGCAATA
GAGACTAATT TGGCCCCCAC TATGAGCGTG ACAGTGGCAA GAGTAGAATT AGCAAGGGTA
GAACGCACCC TTAATGCTAC AGGTAGCGTT GTTGCCTTCG ATCTATTACC AGTGTTACCC
CAGGTGAGTG GGTTACAAAT TCAACAAGTC TTGGTAGAGG AAGGGGAAAC AGTTACTCAA
GGTCAGGTAA TGGCAATTTT AGATGACTCC GTTTTGAAAT CGAAAATTAA CCAAGCTAAA
TCTCAAGTAG CATCAGCTCG CAGTCAAGTA GAGCAAAGAA GGGCTGTTCA CAGTAAGACG
AAAGTAGGTG TGGAGCAAGC TATTGCTGCT TGGGAACAAG CAAGAGCAGA ACGTGATGGT
GTCAAAGCTA CTATTACTCA GGCTCAAGCA GGTAAAGATG AGGCGATCGC TGCTCTCAAA
CAAGCTCAAG CAAGTCGGGA TGATGCTTTT GCCGCTCTCA AACAAACTCA AGCAAGTCGG
GATGATGCTT TTGCCGCTCT TAGACAAACC CAAGCAAGTC GGGATGACAC CCTGGCGTTT
GTAGCGCAAA CTGAAGCTAG GTTATCAGAA GCTCAAGCTA ACGAAGAACA AACCCTGAGA
GATTTTGAGC GATATCAAAC TCTGAGAGGG GAGGGTGTTA TTAGTTCTCA AGAATTAGAA
ACTCGTAGCA CGGCTACGAA AACAGCTAGG GAAGGGGTTC GAGTTGCTAA AGCTAATATT
AATAGTGCTC AAGCTAAGGT TGACATTGCT GAAGCGAATA TTGATAGTGC TCAAGCTAAG
GTTGACATTG CTGAAGCGAA TATTGATAGT GCTCAAGCTA AGGTTGACAT TGCTGGATCA
AATGTTAGGA GTGCAGAAGC TAGGGTAGAA AGTGCACAAG CAAGTCTCAG TAGTACAATA
GCTCAACTAC GGAGTGCAGA GGCTAAAGTT AATAGTGCTA AAGCTAATAT TAGTAGCGCT
CAAGCAGAAG TTAATAGTGC ATTATCCAAT ATTAATAGTG CTATGTCAAG TGTTAGCAGT
GACGAAGCTC GCCTAGAAGA AAAACAAACT CAGCTCTCAC AGACTTTAGT GAAAGCTCCA
GCAAATGGTA TATTAGCAGA ACGGATAGCT CGTGTTGGTG ATGTGAGTTC TAGTAGTAAA
AAATTATTTT CAATTATTAA AGATAATCAA TTAGAATTAC AATTAGAAGT ACCAGAAACT
CAGTTACCAC AAGTTAAAAT TGGCACAAAA GTTAATATTA GTTCTGATGC TGATAGTAGG
ATAAAAATTT CAGGAATAGT GAGACAAATA GCACCATTAG TTAATGAACA AACTCGCGAA
GCTACTGTCA AAATAGACCT ACCTAATAGT GATTTATTAC GACCAGGAAT GTTTTTGCGG
GCAAAAATTA CAACTGCTAC AAATCAAGGA TTAAAAATTC CAGCAAAAGC AGTATTACCT
CAAACAGATG GGCAGTCTAT TGTTTATGTT TTGCAAAGTA ATAATAAAGT TAAAGCTATG
CCTGTAGAAG TAGGAAAAAT TTTAGGTAAA AATAGTGATT TAGCTAATGC TGAAATTGAA
GTAAAAAAGG GTTTAGATTT AGGTAATAAA GTAGTATTAG CAGGTGCAGG TTATTTGAAA
GATGGAGATA TAGTTAAAGT TATTGAGTAA
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| Protein sequence | MAINYRTGKV ITSENRGKWQ GLIIGIGIGV IASLVSMQVS RQKQKTEANT TSTQAIKGAI
ETNLAPTMSV TVARVELARV ERTLNATGSV VAFDLLPVLP QVSGLQIQQV LVEEGETVTQ
GQVMAILDDS VLKSKINQAK SQVASARSQV EQRRAVHSKT KVGVEQAIAA WEQARAERDG
VKATITQAQA GKDEAIAALK QAQASRDDAF AALKQTQASR DDAFAALRQT QASRDDTLAF
VAQTEARLSE AQANEEQTLR DFERYQTLRG EGVISSQELE TRSTATKTAR EGVRVAKANI
NSAQAKVDIA EANIDSAQAK VDIAEANIDS AQAKVDIAGS NVRSAEARVE SAQASLSSTI
AQLRSAEAKV NSAKANISSA QAEVNSALSN INSAMSSVSS DEARLEEKQT QLSQTLVKAP
ANGILAERIA RVGDVSSSSK KLFSIIKDNQ LELQLEVPET QLPQVKIGTK VNISSDADSR
IKISGIVRQI APLVNEQTRE ATVKIDLPNS DLLRPGMFLR AKITTATNQG LKIPAKAVLP
QTDGQSIVYV LQSNNKVKAM PVEVGKILGK NSDLANAEIE VKKGLDLGNK VVLAGAGYLK
DGDIVKVIE
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