Gene Tery_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2313 
Symbol 
ID4245195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3584216 
End bp3585082 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content38% 
IMG OID638107410 
ProductRNA methyltransferase 
Protein accessionYP_722010 
Protein GI113475949 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0718596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAA AAAATTATAA ATTCAATTCT CAAGAAAAAC CTCAAAAAAA TAAACAAATT 
CAACTAAAAG ATGGGCGATC AAAAAAATAT TATTCCCCAA CTGTCAAAGA AGAAGATGAG
GATCTAATCT ACGGACGACA CACTGTACAA GCTGCCCTCA AAAGTGAGCG ATATTTAAAC
CGCATCTGGA TAATTTCTTC TCTGCGATAT GATCCCCGGT TTCATATATT GCTGAACGAG
GCCAAAACGA AGGGTACAAT TATAGATGAA GTAGATGACA GACGCCTAGA TCAAATTACC
CGGAGAAAAC ATCATCAGGG TATAGTAGCT CAAATATGCC CTTATGAGTA TAAGGAACTT
CACGAATTAA TTTCTCAAGC AAAATCGAAA ACTGATCGCT CTGTATTGCT TGTAGCTGAT
GGGATAAATG ATCCCCATAA CTTAGGAGCT ATTATTCGCA CTGGTGAAGC TCTTGGAATA
CAAGGTTTAG TTATTCCGCA AAGACGAGCA GTAGGAATAA CTTCCACAGT GACAAAAGTT
GCTGCAGGAG CCTTAGAAAA TTTTCCTGTA GCTAGAGTTA TTAATCTTAA TAGTGCTTTG
GAAGAATTAA AGAAAGAGGG TTTTTGGATA TATGGTACTG TCGCGAAGGA CGGGGAACCT
ATCCATACAG TAAAATTCAC TGGAGCTATT GTTTTAGTCG TTGGTAGCGA AGGAGAAGGT
TTAAGTCTTC TGATCCAAAA AAATTGTGAC GCCTTAGTTT CTATACCAAT GTCGGGAAGT
ACACCAAGTT TGAATGTATC AGTCGCAACG GGTATGGCTA TTTACGAAAT TCATCGACAA
CACTGGTCAA AAAATTTACG TATTTAG
 
Protein sequence
MSTKNYKFNS QEKPQKNKQI QLKDGRSKKY YSPTVKEEDE DLIYGRHTVQ AALKSERYLN 
RIWIISSLRY DPRFHILLNE AKTKGTIIDE VDDRRLDQIT RRKHHQGIVA QICPYEYKEL
HELISQAKSK TDRSVLLVAD GINDPHNLGA IIRTGEALGI QGLVIPQRRA VGITSTVTKV
AAGALENFPV ARVINLNSAL EELKKEGFWI YGTVAKDGEP IHTVKFTGAI VLVVGSEGEG
LSLLIQKNCD ALVSIPMSGS TPSLNVSVAT GMAIYEIHRQ HWSKNLRI