Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2310 |
Symbol | |
ID | 4243305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3579255 |
End bp | 3580409 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107407 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_722007 |
Protein GI | 113475946 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.162276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATCT CAGCTCAACC TGCTTTACTC GTCTTAGCAG ATGGAACCTC TTACTGTGGC TTATCTTTCG GTGCTCCCGG AACCACCATA GGAGAAGTAG TATTTAACAC AGGAATGACT GGTTATCAAG AAGTTCTCAC AGACCCAAGT TATTGCGGGC AAATAGTTAC TTTTACCTAC CCAGAGTTGG GAAACACAGG AGTTAACTCT GAAGATGAAG AGTCCAACAA ACCACAGATT CAAGGTGCGA TCGCTCGAAA TATTTGTCCA CGTCCTAGTA ACTGGCGTTC TACTAAGTCC TTACCAGAAT ATCTACAAGA GCATAAAATT CAAGGAATTT ACGGTGTAGA TACCCGCGCT TTGACTCGGA AAATTCGGAC TGTAGGAGCA ATGAATGGAG CAATTTCTAC AGAAATTCTC AATCCAACTG AATTGCTAGA ACAAGTTCAG TTTGCTCCTA GCATGGCAGG ATTAAATTTA GTTCAGAAAG TAACAACTAA AGAAACTTAT CAATGGTCTG AACCAACAAA CCCAGACTGG GAGTTTAACC TTTCTGTCTC TGGTAATACA GGAGAAAAAT TTACAGTTGT GGCCATTGAC TTTGGAGTGA AAAAAAATAT CCTTCGACGT TTAGCTAGTT ATGGTTGTCA AGTCATAGTT GTTCCTGCCG ATACACCACC AGAAGAAATT CTCAAGCATA ATCCTGATGG AATTTTCCTT TCTAATGGAC CGGGAGACCC TTCTGCAGTG AGGGAAGGTA TTGAAACTAC TAAAGAGTTG CTAAAATCAT CTAAACCTGT ATTTGGTATT TGCATGGGAC ATCAGGTTCT CGGTCTAGCC TTGGGAGCAG ACACTTTTAA GCTAAAATTT GGTCATCGGG GTCTTAATCA ACCAGCAGGT TTGCAACAAC GAGTAGAAAT TACTAGTCAA AATCATGGAT TTGCCATTAA TGCAGATTCT TTAGTGGCTG AATTAGAAAT TACCCATCTC AACTTGAACG ACCAAACTGT AGCCGGTCTA AGGCATAAAT CTTTACCCTT ATTCTCAGTA CAGTACCACC CGGAAGCAAG TCCCGGCCCT CATGACGCTG ATTATTTGTT TGAACGTTTC GTTCAAGCAA TGAAAGATAC TCGCAAAGTT AAAGCTTTGA GTTGA
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Protein sequence | MSISAQPALL VLADGTSYCG LSFGAPGTTI GEVVFNTGMT GYQEVLTDPS YCGQIVTFTY PELGNTGVNS EDEESNKPQI QGAIARNICP RPSNWRSTKS LPEYLQEHKI QGIYGVDTRA LTRKIRTVGA MNGAISTEIL NPTELLEQVQ FAPSMAGLNL VQKVTTKETY QWSEPTNPDW EFNLSVSGNT GEKFTVVAID FGVKKNILRR LASYGCQVIV VPADTPPEEI LKHNPDGIFL SNGPGDPSAV REGIETTKEL LKSSKPVFGI CMGHQVLGLA LGADTFKLKF GHRGLNQPAG LQQRVEITSQ NHGFAINADS LVAELEITHL NLNDQTVAGL RHKSLPLFSV QYHPEASPGP HDADYLFERF VQAMKDTRKV KALS
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