Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2249 |
Symbol | |
ID | 4243342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3498006 |
End bp | 3498710 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638107351 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_721951 |
Protein GI | 113475890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAATAG GAAAAAAACA ACAATTAATT ACTTATTTAA GTCAATTTAT AACTCCAGCT CGTCGGGAAA AAATCTTATC AGTTTTACAG CAACGAACCC GCGACATTAC TGTTATTTTA GAAGATATTT ATCAGCCCCA CAATGCTAGT GCAGTCCTGA GAAGTTGTGA CAGTTTTGGT GTACAAGATG TGCACATTGT AGAGAATAAA AATATTTTTA CAATCACTCA GAGTGTAACT ATTGGTTCAG ATCGTTGGTT AACATTATAT CGTTATAATG AACAAAGTAT AAACAATACA GAAGAATGTT TAAAGAGATT AAAAAATGAG GGCTATGTAA TAGCAGCAAC AACTCCCTAT AAAGAGCATA TAACCATTGA GGAATTATCT GTAAATACAA AAGTAGCGTT AATGTTTGGT TCAGAAATAA ATGGGTTATC AGAATATGCT AAAAACAATG CAGATGTATC GGTCAAAATT CCCATGGTGG GGTTTAGTGA AAGTTTTAAT ATTTCTGTTA GCGCCGCTCT ATGTTTATAT AATTTGATGA GTCGCCTCAA AAAAGAGCAT AATAATTGGA AATTAACGGA GACAGAAAAA TTAGATTTGG AATTAAATTG GTTGCAGAAA TCTATTAAAG GCGGGGAACT TATTGAGAAG AAATTTTTCA GAGATATTTA TCAGACTACA GGCGGTGGGG AGTAG
|
Protein sequence | MEIGKKQQLI TYLSQFITPA RREKILSVLQ QRTRDITVIL EDIYQPHNAS AVLRSCDSFG VQDVHIVENK NIFTITQSVT IGSDRWLTLY RYNEQSINNT EECLKRLKNE GYVIAATTPY KEHITIEELS VNTKVALMFG SEINGLSEYA KNNADVSVKI PMVGFSESFN ISVSAALCLY NLMSRLKKEH NNWKLTETEK LDLELNWLQK SIKGGELIEK KFFRDIYQTT GGGE
|
| |