Gene Tery_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2249 
Symbol 
ID4243342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3498006 
End bp3498710 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content33% 
IMG OID638107351 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_721951 
Protein GI113475890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAG GAAAAAAACA ACAATTAATT ACTTATTTAA GTCAATTTAT AACTCCAGCT 
CGTCGGGAAA AAATCTTATC AGTTTTACAG CAACGAACCC GCGACATTAC TGTTATTTTA
GAAGATATTT ATCAGCCCCA CAATGCTAGT GCAGTCCTGA GAAGTTGTGA CAGTTTTGGT
GTACAAGATG TGCACATTGT AGAGAATAAA AATATTTTTA CAATCACTCA GAGTGTAACT
ATTGGTTCAG ATCGTTGGTT AACATTATAT CGTTATAATG AACAAAGTAT AAACAATACA
GAAGAATGTT TAAAGAGATT AAAAAATGAG GGCTATGTAA TAGCAGCAAC AACTCCCTAT
AAAGAGCATA TAACCATTGA GGAATTATCT GTAAATACAA AAGTAGCGTT AATGTTTGGT
TCAGAAATAA ATGGGTTATC AGAATATGCT AAAAACAATG CAGATGTATC GGTCAAAATT
CCCATGGTGG GGTTTAGTGA AAGTTTTAAT ATTTCTGTTA GCGCCGCTCT ATGTTTATAT
AATTTGATGA GTCGCCTCAA AAAAGAGCAT AATAATTGGA AATTAACGGA GACAGAAAAA
TTAGATTTGG AATTAAATTG GTTGCAGAAA TCTATTAAAG GCGGGGAACT TATTGAGAAG
AAATTTTTCA GAGATATTTA TCAGACTACA GGCGGTGGGG AGTAG
 
Protein sequence
MEIGKKQQLI TYLSQFITPA RREKILSVLQ QRTRDITVIL EDIYQPHNAS AVLRSCDSFG 
VQDVHIVENK NIFTITQSVT IGSDRWLTLY RYNEQSINNT EECLKRLKNE GYVIAATTPY
KEHITIEELS VNTKVALMFG SEINGLSEYA KNNADVSVKI PMVGFSESFN ISVSAALCLY
NLMSRLKKEH NNWKLTETEK LDLELNWLQK SIKGGELIEK KFFRDIYQTT GGGE