Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2218 |
Symbol | |
ID | 4243251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3457034 |
End bp | 3458482 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638107320 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_721920 |
Protein GI | 113475859 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.184801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA TATTAGATGT CTTAGTCGTG GGTGCAGGTA TCAGTGGCTT GAGTTTAGCC CATAAACTGA CAAAATTAAG TAATAATTCA CCCTTGAAAA TTTTAGTTGC TGAGAGCCAA AACCGAGTCG GGGGTAATAT CACGACAGTT TCTCAAGGAG AATTTCTTTG GGAAGAAGGT CCTAATAGTT TTTCTCCCAC CCCTGAGCTT TTAAAGTTGG CTGTAGATGT TGGCCTCAAA GAGGATTTGA TTTTTGCAGA CCGTAAGTTA CCTCGTTATG TTTATTGGAA TGGTCAATTA CTACCAGTAC CAATGAGCCC AAAGGCAATG TTACAGTCTC AACTACTGAG TAATACTGGA AAGTTACGCG CTTTAGTTGG TGCTTTGGGT TTTGTTCCAC CTGTTGTTGG TATGGATCTA TCTCAGGAAG GGGGAGAAGA AACTGTATCC CAATTTTTCC AAAGACATCT TGGTAAAGAG GTAATGGAAC GATTAGTTGA ACCTTTTGTT TCTGGTGTTT ACGCTGGAGA CCCTAGTCAA CTTAGTGCTA CTGCTGCTTT TTCTAAAGTG GCTCGAATGG CTGACCTTGG TGGTGGACTT TTGGCTGGTG CTGTTTTGTC TGCTCAAAGA AACCCTAAGT CAAAGGCTGC TGCTAATTCT AATATTCCTA AAACTAAACC TGGAGAGTTG GGTTCTTTCC GACGTGGTTT GGAGGTATTG CCAAAAGCGA TCGCTACTTA TTTAGGACAA GCAGTCAAGC TCAATTGGTC TCTCGTGGGT CTTCGTCCGA CAGAAAAACA GACTTATATA GCAGAATTTT CGACTCCCAA TGGTTCTCAG CAAATAGAAA CTCGTACCAT TGCCCTCTCC AGCCCTGCTT ATGCCTGTGC TAAATTATTT AGACCTTTAC TTCCTGAAAT TGCTGGTACT CTTGATGAAT TCTATTATCC TACTGTTGCC TGTGTAGTTT TGGCATATCC TGTTTCTTCT ATCAAGGCCA AGATAGATGG CTTTGGTAAT TTGATTCCTA GAGGTCAAGG CATTCGGACT CTTGGTACTA TTTGGTCTTC TGCTTTATTT TCTGGTAGAA CACCTCTTGG ATGGCAAATT TTTACTAATT ATATTGGTGG TGCAACAGAC CCAGAAATTT CTCACTTAGA TAGTGAAGCC ATCGTTGCAC AAGTTCATCA AGACCTTTGT CAAACTCTAT TAAACCAGAA TCCTGAAAAA CCAAAAGTTC TGGCAGTACA TATATGGTCT CGTGCTATTC CTCAGTATAA TTTAGGTTAT AGTTCTAGGC TGGCTCAGAT TAATCATGGC TTAAAATCTT GGCCTGGAGT ATATCTATGT AGTAATTATA TTGGTGGTGT GGCTCTGGGA GATTGTGTTC GTCGTAGTAT AGAAGTAGCG ACTGATATTT ATTCGGGTAT GGGGTTTGGG GAGCTTTAA
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Protein sequence | MTEILDVLVV GAGISGLSLA HKLTKLSNNS PLKILVAESQ NRVGGNITTV SQGEFLWEEG PNSFSPTPEL LKLAVDVGLK EDLIFADRKL PRYVYWNGQL LPVPMSPKAM LQSQLLSNTG KLRALVGALG FVPPVVGMDL SQEGGEETVS QFFQRHLGKE VMERLVEPFV SGVYAGDPSQ LSATAAFSKV ARMADLGGGL LAGAVLSAQR NPKSKAAANS NIPKTKPGEL GSFRRGLEVL PKAIATYLGQ AVKLNWSLVG LRPTEKQTYI AEFSTPNGSQ QIETRTIALS SPAYACAKLF RPLLPEIAGT LDEFYYPTVA CVVLAYPVSS IKAKIDGFGN LIPRGQGIRT LGTIWSSALF SGRTPLGWQI FTNYIGGATD PEISHLDSEA IVAQVHQDLC QTLLNQNPEK PKVLAVHIWS RAIPQYNLGY SSRLAQINHG LKSWPGVYLC SNYIGGVALG DCVRRSIEVA TDIYSGMGFG EL
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