Gene Tery_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2218 
Symbol 
ID4243251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3457034 
End bp3458482 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content41% 
IMG OID638107320 
Productprotoporphyrinogen oxidase 
Protein accessionYP_721920 
Protein GI113475859 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID[TIGR00562] protoporphyrinogen oxidase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TATTAGATGT CTTAGTCGTG GGTGCAGGTA TCAGTGGCTT GAGTTTAGCC 
CATAAACTGA CAAAATTAAG TAATAATTCA CCCTTGAAAA TTTTAGTTGC TGAGAGCCAA
AACCGAGTCG GGGGTAATAT CACGACAGTT TCTCAAGGAG AATTTCTTTG GGAAGAAGGT
CCTAATAGTT TTTCTCCCAC CCCTGAGCTT TTAAAGTTGG CTGTAGATGT TGGCCTCAAA
GAGGATTTGA TTTTTGCAGA CCGTAAGTTA CCTCGTTATG TTTATTGGAA TGGTCAATTA
CTACCAGTAC CAATGAGCCC AAAGGCAATG TTACAGTCTC AACTACTGAG TAATACTGGA
AAGTTACGCG CTTTAGTTGG TGCTTTGGGT TTTGTTCCAC CTGTTGTTGG TATGGATCTA
TCTCAGGAAG GGGGAGAAGA AACTGTATCC CAATTTTTCC AAAGACATCT TGGTAAAGAG
GTAATGGAAC GATTAGTTGA ACCTTTTGTT TCTGGTGTTT ACGCTGGAGA CCCTAGTCAA
CTTAGTGCTA CTGCTGCTTT TTCTAAAGTG GCTCGAATGG CTGACCTTGG TGGTGGACTT
TTGGCTGGTG CTGTTTTGTC TGCTCAAAGA AACCCTAAGT CAAAGGCTGC TGCTAATTCT
AATATTCCTA AAACTAAACC TGGAGAGTTG GGTTCTTTCC GACGTGGTTT GGAGGTATTG
CCAAAAGCGA TCGCTACTTA TTTAGGACAA GCAGTCAAGC TCAATTGGTC TCTCGTGGGT
CTTCGTCCGA CAGAAAAACA GACTTATATA GCAGAATTTT CGACTCCCAA TGGTTCTCAG
CAAATAGAAA CTCGTACCAT TGCCCTCTCC AGCCCTGCTT ATGCCTGTGC TAAATTATTT
AGACCTTTAC TTCCTGAAAT TGCTGGTACT CTTGATGAAT TCTATTATCC TACTGTTGCC
TGTGTAGTTT TGGCATATCC TGTTTCTTCT ATCAAGGCCA AGATAGATGG CTTTGGTAAT
TTGATTCCTA GAGGTCAAGG CATTCGGACT CTTGGTACTA TTTGGTCTTC TGCTTTATTT
TCTGGTAGAA CACCTCTTGG ATGGCAAATT TTTACTAATT ATATTGGTGG TGCAACAGAC
CCAGAAATTT CTCACTTAGA TAGTGAAGCC ATCGTTGCAC AAGTTCATCA AGACCTTTGT
CAAACTCTAT TAAACCAGAA TCCTGAAAAA CCAAAAGTTC TGGCAGTACA TATATGGTCT
CGTGCTATTC CTCAGTATAA TTTAGGTTAT AGTTCTAGGC TGGCTCAGAT TAATCATGGC
TTAAAATCTT GGCCTGGAGT ATATCTATGT AGTAATTATA TTGGTGGTGT GGCTCTGGGA
GATTGTGTTC GTCGTAGTAT AGAAGTAGCG ACTGATATTT ATTCGGGTAT GGGGTTTGGG
GAGCTTTAA
 
Protein sequence
MTEILDVLVV GAGISGLSLA HKLTKLSNNS PLKILVAESQ NRVGGNITTV SQGEFLWEEG 
PNSFSPTPEL LKLAVDVGLK EDLIFADRKL PRYVYWNGQL LPVPMSPKAM LQSQLLSNTG
KLRALVGALG FVPPVVGMDL SQEGGEETVS QFFQRHLGKE VMERLVEPFV SGVYAGDPSQ
LSATAAFSKV ARMADLGGGL LAGAVLSAQR NPKSKAAANS NIPKTKPGEL GSFRRGLEVL
PKAIATYLGQ AVKLNWSLVG LRPTEKQTYI AEFSTPNGSQ QIETRTIALS SPAYACAKLF
RPLLPEIAGT LDEFYYPTVA CVVLAYPVSS IKAKIDGFGN LIPRGQGIRT LGTIWSSALF
SGRTPLGWQI FTNYIGGATD PEISHLDSEA IVAQVHQDLC QTLLNQNPEK PKVLAVHIWS
RAIPQYNLGY SSRLAQINHG LKSWPGVYLC SNYIGGVALG DCVRRSIEVA TDIYSGMGFG
EL