Gene Tery_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2117 
Symbol 
ID4243953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3308007 
End bp3309710 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content35% 
IMG OID638107224 
Producthypothetical protein 
Protein accessionYP_721825 
Protein GI113475764 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TAGCTCAAAA AAACAACAAC CTTACAAGTA ATTATTATGG TTTGAGCCGT 
TGGTTAAAAT CTCTAACTCT AGGCATAATT CCTGCTATTT TAACTGCTTT ACCAGTGAAT
GCAGCCAAGC ATATTTCTGT TGGTCACGAA GGTTTAAATA CTTTGATTTC AGTATCAGCA
TTAGAAAGTT ATGTTCAAAA TGGAGAAATT AACTATGAAC TAGCTAGCTA TATGCTACTT
TTAGAAGCTG AAGACGAACA GGAATACCGA GACTTCTTGC AAACTCGCTA CAATTTTCCA
CCTCAAATAG TTGCTCAATT TCTTCACTCA CCTATGGGAA AATTATTCCT CAACAGTTTA
GGAGAAGTAA TTAAAACTCA TTCAGTTAAT AGTGGTTCAT CCTCTATTGA AAATGGTGCA
GAAGCAATTA AAACAGCCTT ATTAAAATCT GCAAATGACT CTGCAGGCTT AAGTATTATA
AATTTTGTCC GTCATTTTCC CAGTGATGTT ATGTGGCTAG AAGCAAAAAA AATTGTAGCT
GTGACTGAAA AAATTTCTAC TGTAGAACAA GAGACAAAAG CTTTGGTTGA AACAGTAGCA
GAACTAACAT TAAAAGAAGC TAATCAAGAA AAAAGAGTAG ATTTCTCGCA ATTACCGGAT
ATTAGGAAAA AGGGAAAATA TAGCTTTTCA CAACAAAAAA TTACTCTAGA AGATACCGGA
CGTAATCGCA ATTTTTCAGC CCAATTTTAT TTGCCAAATA TATCTTCAGA AGAAACCTCA
ATTCCTGTAG TAGTTATTTC TCATGGTTTA GGTTCTAATG GGGTAAACTT CCAGAGCTTG
GCCGAACATT TAGCCTCTTA TGGATTTGCT GTTGCCCTAC CTCAACATAG AGGTAGTAAT
TATGAATATA TCCAGAAATT CTTAGCAGGT AAAACTCAAG ATATGTTTCA AGGGAATGAG
TTTATCGATC GCCCTTTAGA TATTTCTTTC TTATTAAATG AATTAGAACA GTTAAATAAA
TATCAATTAC AAGGTCAGTT AAACTTAGAA AAAGTTGGCA TATTTGGTCA TTCTTTTGGA
GCCTCTACGG CCTTTGCCTT AGCAGGTGCA GAGATTAACT TTAATCAGCT CCAACAAGAC
TGTGGTCCAC AAATGGAAAT TTTGAATATG TCGCTGCTGC TACAGTGCCG TGCTTTGGAA
TTGAAACCAC AAAAATATAA CTTGAAAGAT GATAGAATTG GAGCAATATT TGTACTTGAC
CCAGTGAATA GTAGTTTATT TGGAAAAGCT GGTATCAGTC AGATTAAGTT ACCTGTTTTA
TGGGGAAGTG GGAGTGAAGA TAAAATTACT CCCATAGTTT TAGAACAAGC AAACTCTTTT
ACTTGGTTGC CAACTACCAA TAAATATTTG GTATTAACAG AGGGAGCAGA TCATATTAAT
ATTAATCTGG GTGCAGTTAA CAAAAATGCC TTTACTTCTT TAGAAGAGTT AATTAAGCCA
GACCCAGAAG TAGTAGTTGG TTATGCTAAT GCTTTTGGTT TAGCATTTTT CCAAAGCCAC
GTTGCCGATC GCCCTGAATA TCATTCTTAT TTACAAGCAT CTTATGCTAA GGCGATCAGC
GAGCGACCTT TTAATCTGAG TTTAGTGCGT TTTTTGCCAG AAACTCAGTT AAACAAAGTA
TCAAAACAAG CAAGGAAAGA CTAA
 
Protein sequence
MEKVAQKNNN LTSNYYGLSR WLKSLTLGII PAILTALPVN AAKHISVGHE GLNTLISVSA 
LESYVQNGEI NYELASYMLL LEAEDEQEYR DFLQTRYNFP PQIVAQFLHS PMGKLFLNSL
GEVIKTHSVN SGSSSIENGA EAIKTALLKS ANDSAGLSII NFVRHFPSDV MWLEAKKIVA
VTEKISTVEQ ETKALVETVA ELTLKEANQE KRVDFSQLPD IRKKGKYSFS QQKITLEDTG
RNRNFSAQFY LPNISSEETS IPVVVISHGL GSNGVNFQSL AEHLASYGFA VALPQHRGSN
YEYIQKFLAG KTQDMFQGNE FIDRPLDISF LLNELEQLNK YQLQGQLNLE KVGIFGHSFG
ASTAFALAGA EINFNQLQQD CGPQMEILNM SLLLQCRALE LKPQKYNLKD DRIGAIFVLD
PVNSSLFGKA GISQIKLPVL WGSGSEDKIT PIVLEQANSF TWLPTTNKYL VLTEGADHIN
INLGAVNKNA FTSLEELIKP DPEVVVGYAN AFGLAFFQSH VADRPEYHSY LQASYAKAIS
ERPFNLSLVR FLPETQLNKV SKQARKD