Gene Tery_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2062 
Symbol 
ID4245710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3217926 
End bp3219299 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content40% 
IMG OID638107173 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_721776 
Protein GI113475715 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.142331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA AACCAGGAAA AGCATCAATC TATCTTCAAT CTCCTCACCA CGTTGTCATC 
GTTGGAGGTG GATTTGCAGG ACTAGAAGCT GCCAAGCAAC TTGGGAAAGC ACCTGTAAAA
GTAACCTTGG TTGACAAAAG AAATTTCCAT CTATTTCAAC CACTACTTTA TCAGGTAGCG
ACAGGAAGTC TTTCCCCTGG AGATATTGCC TCTCCTCTTC GGGGTGTAGT TGCAGAACAG
AAAAACACCC ATGTTATTAT GGGAGAAGTC GTAGACATCG ATCCCGAAGA GAAAAAACTT
ACCTTACATG ATCAAGAATT AAATTATGAT TCATTAGTTA TAGCCACTGG TGTGAGCCAT
AACTACTTCG GAAATGATTG GTCAGAAAAA GCTCCCGGAC TAAAAACAGT AGAAGATGCA
TTAGAAATGC GTCGGAGAAT ATTCGCCTCC TTTGAAGCAG CAGAAAAAGA AACAGACTTA
GAAAAACGGA AGGCACTCTT AACCTTTGCT ATTGTGGGTG CAGGTCCAAC AGGTGTTGAA
TTAGCTGGTG CTCTAGCAGA ACTAGCTCAT ACCAAATTAA AAGAAGAATA TCGTTCTATC
AATACCACTG AAGCTAAAAT TTATCTGATT CAAAGTGGAG ACAGAGTTTT ACCCTCCTTC
AAGCCTGCTT TATCACAGAA AGCCAGACTA GAACTAGAGA AATTGGGCGT CACAGTAATG
ACCAAAACAC GAGTAACTAA TATTGAAAAC AATGTAGTTA CTGTTAGCTC TGGAGAAACA
AAAACCGAAA TTCCAGCTCA TACAATATTA TGGGGAGCAG GAGTTAAAGC ATCAAAAGTA
TCTGAAATCA TATCTAACCG TACAGGAGCA AAATTAGACC GTGCAGGCCG TGTGTTTGTC
AACAAAGACT TGACAATACC TAATTATTCT GATATATTTG TAATTGGAGA CTTAGCCAAC
TTCTCCCATC AAGGTGACTC CCCAATTCCT GGAGTTGCAC CAGCAGCAAT GCAGGAAGGA
TTTTATGTCG CAAAGCTAAT TAGAAAGCGC TTGAAAGGTG AAAGTTTAAA GCCATTCTAT
TATATTGACT ATGGTAGTTT AGCTGTTATC GGTCGTCACC AAGCAGTTGT ACAGTACAAA
GCCATTCGTT TCTCAGGACC TATAGCTTGG CTTGCCTGGT TATTTATTCA TATCTACTAT
ATGATAGAAT TTGATAACCA ATTAATTGTA ATGATCCAGT GGGCATGGAG CTACTTTACA
GGTCAAGGTG GTGCTCGTCT AATCACTGAA AAATCAATGA AGACACCCAG TTATGAAGAA
CGTCAAGCTC GCTATACTCC ATTAGTACCA AGTAAATCAT CTATTGAAAC CTAA
 
Protein sequence
MSLKPGKASI YLQSPHHVVI VGGGFAGLEA AKQLGKAPVK VTLVDKRNFH LFQPLLYQVA 
TGSLSPGDIA SPLRGVVAEQ KNTHVIMGEV VDIDPEEKKL TLHDQELNYD SLVIATGVSH
NYFGNDWSEK APGLKTVEDA LEMRRRIFAS FEAAEKETDL EKRKALLTFA IVGAGPTGVE
LAGALAELAH TKLKEEYRSI NTTEAKIYLI QSGDRVLPSF KPALSQKARL ELEKLGVTVM
TKTRVTNIEN NVVTVSSGET KTEIPAHTIL WGAGVKASKV SEIISNRTGA KLDRAGRVFV
NKDLTIPNYS DIFVIGDLAN FSHQGDSPIP GVAPAAMQEG FYVAKLIRKR LKGESLKPFY
YIDYGSLAVI GRHQAVVQYK AIRFSGPIAW LAWLFIHIYY MIEFDNQLIV MIQWAWSYFT
GQGGARLITE KSMKTPSYEE RQARYTPLVP SKSSIET