Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2062 |
Symbol | |
ID | 4245710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3217926 |
End bp | 3219299 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107173 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_721776 |
Protein GI | 113475715 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.142331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTA AACCAGGAAA AGCATCAATC TATCTTCAAT CTCCTCACCA CGTTGTCATC GTTGGAGGTG GATTTGCAGG ACTAGAAGCT GCCAAGCAAC TTGGGAAAGC ACCTGTAAAA GTAACCTTGG TTGACAAAAG AAATTTCCAT CTATTTCAAC CACTACTTTA TCAGGTAGCG ACAGGAAGTC TTTCCCCTGG AGATATTGCC TCTCCTCTTC GGGGTGTAGT TGCAGAACAG AAAAACACCC ATGTTATTAT GGGAGAAGTC GTAGACATCG ATCCCGAAGA GAAAAAACTT ACCTTACATG ATCAAGAATT AAATTATGAT TCATTAGTTA TAGCCACTGG TGTGAGCCAT AACTACTTCG GAAATGATTG GTCAGAAAAA GCTCCCGGAC TAAAAACAGT AGAAGATGCA TTAGAAATGC GTCGGAGAAT ATTCGCCTCC TTTGAAGCAG CAGAAAAAGA AACAGACTTA GAAAAACGGA AGGCACTCTT AACCTTTGCT ATTGTGGGTG CAGGTCCAAC AGGTGTTGAA TTAGCTGGTG CTCTAGCAGA ACTAGCTCAT ACCAAATTAA AAGAAGAATA TCGTTCTATC AATACCACTG AAGCTAAAAT TTATCTGATT CAAAGTGGAG ACAGAGTTTT ACCCTCCTTC AAGCCTGCTT TATCACAGAA AGCCAGACTA GAACTAGAGA AATTGGGCGT CACAGTAATG ACCAAAACAC GAGTAACTAA TATTGAAAAC AATGTAGTTA CTGTTAGCTC TGGAGAAACA AAAACCGAAA TTCCAGCTCA TACAATATTA TGGGGAGCAG GAGTTAAAGC ATCAAAAGTA TCTGAAATCA TATCTAACCG TACAGGAGCA AAATTAGACC GTGCAGGCCG TGTGTTTGTC AACAAAGACT TGACAATACC TAATTATTCT GATATATTTG TAATTGGAGA CTTAGCCAAC TTCTCCCATC AAGGTGACTC CCCAATTCCT GGAGTTGCAC CAGCAGCAAT GCAGGAAGGA TTTTATGTCG CAAAGCTAAT TAGAAAGCGC TTGAAAGGTG AAAGTTTAAA GCCATTCTAT TATATTGACT ATGGTAGTTT AGCTGTTATC GGTCGTCACC AAGCAGTTGT ACAGTACAAA GCCATTCGTT TCTCAGGACC TATAGCTTGG CTTGCCTGGT TATTTATTCA TATCTACTAT ATGATAGAAT TTGATAACCA ATTAATTGTA ATGATCCAGT GGGCATGGAG CTACTTTACA GGTCAAGGTG GTGCTCGTCT AATCACTGAA AAATCAATGA AGACACCCAG TTATGAAGAA CGTCAAGCTC GCTATACTCC ATTAGTACCA AGTAAATCAT CTATTGAAAC CTAA
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Protein sequence | MSLKPGKASI YLQSPHHVVI VGGGFAGLEA AKQLGKAPVK VTLVDKRNFH LFQPLLYQVA TGSLSPGDIA SPLRGVVAEQ KNTHVIMGEV VDIDPEEKKL TLHDQELNYD SLVIATGVSH NYFGNDWSEK APGLKTVEDA LEMRRRIFAS FEAAEKETDL EKRKALLTFA IVGAGPTGVE LAGALAELAH TKLKEEYRSI NTTEAKIYLI QSGDRVLPSF KPALSQKARL ELEKLGVTVM TKTRVTNIEN NVVTVSSGET KTEIPAHTIL WGAGVKASKV SEIISNRTGA KLDRAGRVFV NKDLTIPNYS DIFVIGDLAN FSHQGDSPIP GVAPAAMQEG FYVAKLIRKR LKGESLKPFY YIDYGSLAVI GRHQAVVQYK AIRFSGPIAW LAWLFIHIYY MIEFDNQLIV MIQWAWSYFT GQGGARLITE KSMKTPSYEE RQARYTPLVP SKSSIET
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