Gene Tery_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1965 
Symbol 
ID4244389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3043880 
End bp3046588 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content39% 
IMG OID638107083 
Productcyanophycin synthetase 
Protein accessionYP_721690 
Protein GI113475629 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.644693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TCAAACTCCA GACATTACGT GGTCCAAATT ATTGGAGCAT ACACCGCCAT 
AAGCTGGTAG TTATGCGTCT AGATTTGGAA GATCTTTACG AAAAATATAC ATCTGACATC
CCTGGTTTCT ACAAAGGATT AACAGAAGTT CTACCAAGTT TGGTAGAACA CCTTTGTTCG
CCTGGAGTCA AGGGTGGTTT CCTAACTCGT GTGGAAAAAG GAACATTAAT AGGCCATGTA
ATCGAACACG TTGCCATAGA ATTACAAGAG CTAGCAGGAA TGCCAGTTGG TTTTGGTAGG
ACAAGGGAAA CATCTACTAC AGGAGTATTC CAGGTAGTAA TAGAATATGA AAATGAACAA
GCAGGTCGTT ATGCAGCACG AGCAGCAGTA AGGCTTTGCC AAAGTATTGT TGACACAGGT
ACATATCCAG CAACAGAATT ACAGCAAGAT TTAGAAGACC TTAAGGAATT AAAAAATCAG
GCATCTTTAG GTCCAAGTAC AGAAGCTATA GTTAAAGAAG CAGAAGCAAG AGGTATTCCT
TGGACTCAAC TAGGTGCTAG GTTTATGATT CAGTTTGGTT ATGGGGTTAA TCAAAAGAAA
ATTCAGGCAA CCCTAAGTAA CCAAACCGGA ATTCTTGGTG TAGAACTTGC TTGTGACAAA
GAAGGCACAA AAAGAATTCT CAAAGATGCA GGAGTACCAG TACCTCGTGG TACAGTTGCT
CGTTATTTTG ATGAGCTTCA AGATGCTATT GAATATGTCG GAGGCTATCC TATTGTCATT
AAACCTCTAG ACGGAAATCA TGGTCGTGGC ATTACCATAG ATGTTAAAAA TTGGCAAGAG
GCAGAAGAAG CATACGATTT AGCTAGAAAA GCTTCGAAAA CAAAAACTGT AATTGTTGAA
CGTTACTACA CGGGCAAAGA CCACCGAGTT TTAGTAGTAA ATGGCAAAGT TGTAGCTGTA
GCTGAACGAG TTCCAGCCCA TGTGGTGGGA AATGGTAAGT CTACAATAGC GGAACTAATT
GAAGAGACCA ATAGAGATCC TCAAAGAGGG GATGGACATG ATAACATCTT GACTCGAATA
ACGGTAGATA AGTCTGCCCT TGATATTCTA GGAAAACAGG GATACAGTAT AGATTCAATA
CCTCTCAAAG GAAAAAAGTG CTTTTTAAGA GCAACGGCTA ATCTAAGCAC TGGTGGTATA
GCAGTAGACC GCACTGATGA GATACACCCG GAAAATGTTT GGCTATTATC TAGAGTTGCT
AAGATAATTG GTCTAGATAT TGCAGGTATA GATGTAGTTA CTGAAGATAT TTCTCAACCA
CTACGAGAAG TGGAAGGAGT TATAGTAGAG GTTAATGCTG CCCCTGGTTT CCGGATGCAT
GTTGCTCCTA GTAGAGGTCT AGCAAGAAAT GTGGCGGGGG CAGTGATGGA TATGTTATTC
CCCGGATCAA AAAATGGACG AATACCAATA TTGTCTGTTA CTGGCACTAA TGGAAAGACA
ACTACTACAC GACTACTGGC TCATATTATT AAACAGACAG GTAAAGTAGT TGGATATACT
ACTACTGATG GTACTTATAT TGGTGAGTAT TTGGCTGAAA CTGGTGATAA TACTGGACCT
CAAAGTGCAC ATTTAATTCT TTCAGACCCT ACAGTAGAGG TCGCTGTTTT AGAAACAGCA
CGGGGTGGTA TTTTGCGTTC TGGTTTAGGT TTTTCAAGTT GTGAGGTGGG AATAGTATTA
AATGTAACTG CCGATCACTT GGGTATTGGA GATATAGATA CCATAGAACA ATTGGCTAAA
CTAAAAAGTG TAGTAGCTGA GTCGGTAATG CCAAAAGGAT ATGCAGTTTT GAATGCTGAA
GACCCATTAG TCGCAGCTAT GGCAGATAGA GTTAAAGGTC AAGTTGCTTA TTTCTCAATG
GATCCAAATA ATGAATTGTT ATTAAGACAT ACAGAAGCAG GGGGTCTGGC AGCAATTTAT
GAGAATGGCT ATATTTCAAT TTTGAAAGGG GATTGGACTT TAAGAATTGA AAAAGCAGTT
AATGTGCCAA TTACAATGGC TGGTAAAGCT CCTTTTATGA TTGCTAATGC TCTGGCAGCT
TGTTTGGCAG TTTTTACTCA AGGAGTAAAG ATAGAGCATA TTCGGAAAGG TTTGTCAACT
TTTGTGGCTT CAGTGGATCA AACTCCAGGC CGGATGAATA TGTTTAATAT GGGTAGTTAT
CATGCTTTGG TAGATTATGC TCATAATCCT GCTAGCTATG AAGCATTAGG TGGATTTGTC
AGAAATTGGC CGGGAAAACG AATTGGTGTG GTTGGTGGAC CAGGCGATCG CCGTGATGAA
GACTTTGTTT CTCTTGGAGA ACTAGCAGCA GATATCTTTG ATGAAATTAT TATTAAAGAA
GATGATGATA CTAGAGGACG ACCTAGAGGG AATGCTGCTG AGCTTATTTG TCAGGGTGTA
AAACAGTTTT TAAATGGAAT AAAAAATTCT GAATCAAAAG CTACTTATGA GTCAATATTA
GATGAGACAG CAGCTATTAA TACAGCTTTA GACAGAGCTC CAATTGATGG ATTAGTAGTG
ATTTTACCAG AAAGTGTTAA CAGAGCTATT AGTTTAATAG AAGGTCGTCA CGTTATTCAA
GATATTGAAT TGCTTCAAGA TAGTCAAAGA GAGCCTAAGG ATCAAGAAGT TTTAAAAAGT
TCAATTTAA
 
Protein sequence
MKILKLQTLR GPNYWSIHRH KLVVMRLDLE DLYEKYTSDI PGFYKGLTEV LPSLVEHLCS 
PGVKGGFLTR VEKGTLIGHV IEHVAIELQE LAGMPVGFGR TRETSTTGVF QVVIEYENEQ
AGRYAARAAV RLCQSIVDTG TYPATELQQD LEDLKELKNQ ASLGPSTEAI VKEAEARGIP
WTQLGARFMI QFGYGVNQKK IQATLSNQTG ILGVELACDK EGTKRILKDA GVPVPRGTVA
RYFDELQDAI EYVGGYPIVI KPLDGNHGRG ITIDVKNWQE AEEAYDLARK ASKTKTVIVE
RYYTGKDHRV LVVNGKVVAV AERVPAHVVG NGKSTIAELI EETNRDPQRG DGHDNILTRI
TVDKSALDIL GKQGYSIDSI PLKGKKCFLR ATANLSTGGI AVDRTDEIHP ENVWLLSRVA
KIIGLDIAGI DVVTEDISQP LREVEGVIVE VNAAPGFRMH VAPSRGLARN VAGAVMDMLF
PGSKNGRIPI LSVTGTNGKT TTTRLLAHII KQTGKVVGYT TTDGTYIGEY LAETGDNTGP
QSAHLILSDP TVEVAVLETA RGGILRSGLG FSSCEVGIVL NVTADHLGIG DIDTIEQLAK
LKSVVAESVM PKGYAVLNAE DPLVAAMADR VKGQVAYFSM DPNNELLLRH TEAGGLAAIY
ENGYISILKG DWTLRIEKAV NVPITMAGKA PFMIANALAA CLAVFTQGVK IEHIRKGLST
FVASVDQTPG RMNMFNMGSY HALVDYAHNP ASYEALGGFV RNWPGKRIGV VGGPGDRRDE
DFVSLGELAA DIFDEIIIKE DDDTRGRPRG NAAELICQGV KQFLNGIKNS ESKATYESIL
DETAAINTAL DRAPIDGLVV ILPESVNRAI SLIEGRHVIQ DIELLQDSQR EPKDQEVLKS
SI