Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1946 |
Symbol | |
ID | 4244370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 3016554 |
End bp | 3017336 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638107066 |
Product | hypothetical protein |
Protein accession | YP_721673 |
Protein GI | 113475612 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0246863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAT ACTTACAAGT ACTAAAATTA TTTTGGAGTG CAGCTATTGC GGCTGAATTA GAATACCGTT TCAACTTTAT GATCGCAGCC ATTAGCAGCA TAGGAGGTTT ACTAGGTAGC TTATTTAGTT TACTTCTATT CTATAGAACA GGCTACAAAT TTCAAGGTTG GAATTGGGAA GAATCTTTAA TTATCCTAGC AATTTTTACC ATTTTACAGG GTCTTTCAGC AACTTTTTTG ATTCCTAGTT TAAACCGAAT TGTGAAGCAG GTACAAGAAG GTACCCTAGA TTTTGTCCTT CTCAAACCCA TTAGTAGTCA ATTTTTGCTT TCTACTCGCA CAATTTCTCC CTGGGGAATA CTAGACATAA TTTTTGGCGG GTTCCTCTTA GAATATGCCG GTAGTAAACT TGGTTTAGGA ATAAGCAATT ATTTGCTTAC CATACTTCCA ATGGTCTGTG GGATAATTAT TCTTTATAGT ATCTGGTTTA TCCTGGGCTC TACCAGTATT TGGTTTGTCA AAATTTATAA CTTAACAGAA GTCCTCAGAG GTTTATTAGG AGCAGGAAGA TATCCAATAG TAGCTTACCC TACTGCTTAT CGTTTCTTCT TCACTTTTCT AGTACCAGTG GCATTTTTAA CTACTGTACC AGCTCAAACC ATATTAGGTA AGGCTGGAAG TACTTGGATA TTGGGTTCTT TTGTTTTAGC AGGCGGATTA TTTTTTGCCT CTATTCAATT TTGGCGACTC GCTCTGCGCT ATTATACAAG TGCTTCTAGT TAA
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Protein sequence | MKRYLQVLKL FWSAAIAAEL EYRFNFMIAA ISSIGGLLGS LFSLLLFYRT GYKFQGWNWE ESLIILAIFT ILQGLSATFL IPSLNRIVKQ VQEGTLDFVL LKPISSQFLL STRTISPWGI LDIIFGGFLL EYAGSKLGLG ISNYLLTILP MVCGIIILYS IWFILGSTSI WFVKIYNLTE VLRGLLGAGR YPIVAYPTAY RFFFTFLVPV AFLTTVPAQT ILGKAGSTWI LGSFVLAGGL FFASIQFWRL ALRYYTSASS
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