| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1919 |
|---|
| Symbol | |
|---|
| ID | 4242668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 2971599 |
|---|
| End bp | 2972078 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638107040 |
|---|
| Product | flavin reductase-like, FMN-binding |
|---|
| Protein accession | YP_721647 |
|---|
| Protein GI | 113475586 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0340675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGACG AACAGGCAAA AAAAACTATA CTGCGTAAAA TTCCCCATGG ATTATACATT
TGTGGTGTTA AAGATGGGGA TGAAGTAAAC GGCTTTACAG CTAGTTGGGT AATGCAAGCA
TCTTTTAAGC CTCCCCTAAT TGTTAACTGT GTTAATAAAT CTTCTATATC CCATACCATG
ATTAAGACTA GTGGAGTATT TTCCCTTAGT TTCTTAGGAG CAGAGCAAAA AGATTTAGCT
CAACAGTTTT TCAAACCTCA ACGTCGTGTG GGAAATAAAT TTGAAGAGGT AGAATTTTAT
TTGGGGGAAA CTGGTTGTCC AATTATTTCT GATACTCTTG GCTATGTTGA ATGTAGAGTT
ATGGGTGCTG TCGAAAAAGG GGATCATACT GTGTATGTAG GAGAAGTAAT TGCAGCAGGT
GTGCATCGTG AGGGAGATCC TCTGTTATTA GAAAATACAG GCTGGAATTA TGGTGGCTAG
|
|---|
| Protein sequence | MLDEQAKKTI LRKIPHGLYI CGVKDGDEVN GFTASWVMQA SFKPPLIVNC VNKSSISHTM
IKTSGVFSLS FLGAEQKDLA QQFFKPQRRV GNKFEEVEFY LGETGCPIIS DTLGYVECRV
MGAVEKGDHT VYVGEVIAAG VHREGDPLLL ENTGWNYGG
|
|---|
| |