Gene Tery_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1863 
Symbol 
ID4245484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2848949 
End bp2849218 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID638106984 
ProductRNA-binding region RNP-1 
Protein accessionYP_721592 
Protein GI113475531 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.255815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTTT ACGTTGGAAA CCTTTCCTAT GATGCAACAG ATGAGGATCT AAAGACTGCC 
TTTGCTAAAT ATGGTAATGT TAAGCGAGTT CAAGTCCCTA ATGATCGTGA AACTGGTCGC
CCCCGGGGCT TTGCTTTTGT AGAAATGGAG AGTGAAGATG AAGAGACAGC AGCAATTGAG
GGACTGGATG GTTCTGAATT AATGGGACGT ATTCTCAAAG TTAATAAGGC CAGGCCACGA
GAAGAACGAG GTAGTGGTGG TAGAAGATAG
 
Protein sequence
MSVYVGNLSY DATDEDLKTA FAKYGNVKRV QVPNDRETGR PRGFAFVEME SEDEETAAIE 
GLDGSELMGR ILKVNKARPR EERGSGGRR