Gene Tery_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1858 
Symbol 
ID4242721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2843174 
End bp2843704 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content39% 
IMG OID638106979 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_721587 
Protein GI113475526 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.816062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.703052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CAGTAGAAAT TTTATCGGCA AAAGAGTTAC GGCGTAGTGT TACTCGTCTG 
GCTTCCCAAG TAATTGAAAA GTCAGGAGAT TTATCTCAAT TGCTGTTATT AGGTATTCAT
ACTAGAGGAG TGCCACTAGC AAAAGTTTTA GGAAATCAAA TTGAATTACT AGAACAAGTT
AAAGTACCTG TGGGAGCATT AGATATTACC TTTTATCGAG ATGATTTGGA CCAAGTGGGA
ATGCGAACCC CGGCAAAAAC AGAAATTCCT GTGGATATTA CTGGTAAGAT TGTGGTGTTA
GTTGATGATG TGATTTATAA AGGTCGAACA GTTCGAGCTG CTTTGAATGC AGTTGTTGAG
TATGGTCGCC CAGAGGTAAT TAGATTAGTT GTTTTAGTGG ATAGGGGTCA TCGAGAGTTG
CCTATTCATC CAGATTTTAC AGGTAAAAAA TTACCCACTT CTAAGGAAGA ACAGGTGAAG
GTTTATATGC AAGCTATTGA TGGAAGAGAT GGGGTAGAGT TATTTCGATA G
 
Protein sequence
MSKTVEILSA KELRRSVTRL ASQVIEKSGD LSQLLLLGIH TRGVPLAKVL GNQIELLEQV 
KVPVGALDIT FYRDDLDQVG MRTPAKTEIP VDITGKIVVL VDDVIYKGRT VRAALNAVVE
YGRPEVIRLV VLVDRGHREL PIHPDFTGKK LPTSKEEQVK VYMQAIDGRD GVELFR