Gene Tery_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1856 
Symbol 
ID4242719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2840104 
End bp2841153 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content44% 
IMG OID638106977 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_721585 
Protein GI113475524 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00721789 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTG TTATTCTTGC TGGTGGAAAA GGAGAACGTT TTTGGCCCCT GAGTCGTAAG 
CATCGGCCTA AACAGTTTCT TTCTCTTGAC GGTAGTGGTA AAAGTTTGTT ACAAACCACA
GCACAGAGAC TACTCCCATT ATCTAATGAT TGGGGTGGTT TATGGGTTGT GACTTCGGCA
ATGTTGGCCG CAGGTGTGGC ACAACAGTTA CCCCAAATAC CACAGGAAAA TATATTGGCA
GAACCGGAAG GAAGGGATAC TGCTCCTGCT GTTGCTTGGA CAACAATAGA AGCGGCACAT
CGTTATGGGG AAGATATAGT TGTTGGATTT TTTCCAGCTG ACCATTGGAT CGGTGAGCCA
GAAATATTCC ATAAGACTCT GGAGGCAGCA GCAGAATTGG CCACTAACCA GGAGGCTATT
GTCACCCTAG GTGTGAAACC TTCTTTTCCT TCTACTGGTT ATGGGTATAT TGAACAGGGA
AAAAAAGCAG GAAATTTTGG CGGGTTTGAC GTTTATCAGG TGGCACGGTT TACAGAAAAG
CCTAACCGAG AGAAGGCGGA GGAGTTTTTA GCAACGGGGC GTTTTAGTTG GAATGGCGGT
ATTTTTGTTT TCAGGGTGGG GGTGATGTTG GCGGAGTTGC GAAAATATGT GCCAACAATG
ATGACTGTTT TGGAGACGAT GGGTCCTGGG GGTTATTCTC AGTTGGAGAA AAAGAGTATT
GACTATGCAG TGATGGAGAA GACTGATAAG GCTTTTGTGT TACCTGTGGC TTTTGGTTGG
GATGATTTGG GTGACTGGAA TGGTTTGGAA CGTTTGGTTA AGGGGGATAG TGTGAATGTG
GAGTTGGCTA ATCATTTGGG GTTGGATACG AAGAGGTCGA TTTTTTTTGC TACCGATGAT
GATGATACTA TTGTAACTAT TGGTTTGGAG GATGTGGTTG TTGTTAGGGA TGGGAATGTG
ACTTTGATTG TTAAAAAGGA GCGATCGCAG GATATTAAGA AGGTTTTGAA GAGTTTGGCT
AATCATCCTA AGTTTAAGGA TTTATTGTAG
 
Protein sequence
MIPVILAGGK GERFWPLSRK HRPKQFLSLD GSGKSLLQTT AQRLLPLSND WGGLWVVTSA 
MLAAGVAQQL PQIPQENILA EPEGRDTAPA VAWTTIEAAH RYGEDIVVGF FPADHWIGEP
EIFHKTLEAA AELATNQEAI VTLGVKPSFP STGYGYIEQG KKAGNFGGFD VYQVARFTEK
PNREKAEEFL ATGRFSWNGG IFVFRVGVML AELRKYVPTM MTVLETMGPG GYSQLEKKSI
DYAVMEKTDK AFVLPVAFGW DDLGDWNGLE RLVKGDSVNV ELANHLGLDT KRSIFFATDD
DDTIVTIGLE DVVVVRDGNV TLIVKKERSQ DIKKVLKSLA NHPKFKDLL