Gene Tery_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1843 
Symbol 
ID4241919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2826622 
End bp2827839 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content39% 
IMG OID638106964 
Productamidohydrolase 
Protein accessionYP_721572 
Protein GI113475511 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCAA CTATTCCCAA CTCAAATTCC CTTATCGAGT CTCAACTGCG CCCAGAGATT 
AGAAAAATGC AACCTCTATT AGTTGAGTGG CGACGACATT TGCATCAAAG ACCAGAATTA
GGTTTCAAAG AACACTTAAC AGCAAAATTT ATTGCTCAAA AATTACAAGA GTGGGGCATC
GAACATCAAA CAGGAATTGC TAACACAGGA ATAGTTGCAA CTATTAACAG CAATAAACCA
GGACGGGTAC TAGCTATTAG AGCCGACCTA GACGCACTAC CAATACAAGA ATTAAACGAC
GTCCCATATA GATCCATACA TAATGGTGTA ATGCACGCCT GTGGCCATGA TGGACATACA
GCGATCGCCC TGGGTACTGC CCACTATCTC GCTACTCATC CTGAAAATTT TAGTGGCATA
GTAAAAATAA TCTTCCAACC TGCCGAAGAA GGACCAGGAG GATCCAAACC AATGATCGAA
GCAGGAGTAC TAAAAAACCC TGATGTAGAT GCCATAATTG GTTTGCACCT ATGGAATAAT
CTCCCCCTAG GCACATTAGG AGTCCGCAGT GGTGCTCTTA TGGCAGCCAG CGAAAGATTT
AATTGCACAA TTTTAGGGAA AGGTGGCCAT GGAGCCATGC CACATCAAAC AATAGATTCT
ATTGTAGTAG CAGCACAAGT TATTAATGCA TTACAAACAA TAGTATCTCG GAATATTAGT
CCTATAGACT CAGCAGTTGT AACTATAGGT CAGTTGAACG CAGGTAGAGC ATTTAATGTT
ATAGCTAATA CTGCTAGAAT GGCTGGTACA GTGCGCTATT TTAATTTAGA TTATCAAAAT
TATTTTAGTA AACAAATGGA GCAAATAATT TCTGGAATTT GCGCAAGCTA TGGAGCTAAT
TATGAGTTGA ATTATCAACC ACTTTATCCC CCATTAATTA ACAACCCAAA AGTTACAGAT
ATAGTTAGAA GTGTTGCGGA ATTAATAGTA GAAACTCCTG CCGGTGTCAT ACCAGAATGT
CAAACCATGG GAGCAGAAGA TATGTCATTT TTCTTACAAG AAGTACCCGG TTGTTATTTC
TTTTTAGGCT CTGCAAATTC TGAAAAAGGT TTAGCTTATC CTCACCATCA TCCTAGATTT
GACTTTGATG AAACAGCTTT AGGAATAGGA GTAGAAATGT TTATCCGTTG TACAGAAAAG
TTTAGTATTC AGGAATAA
 
Protein sequence
MVSTIPNSNS LIESQLRPEI RKMQPLLVEW RRHLHQRPEL GFKEHLTAKF IAQKLQEWGI 
EHQTGIANTG IVATINSNKP GRVLAIRADL DALPIQELND VPYRSIHNGV MHACGHDGHT
AIALGTAHYL ATHPENFSGI VKIIFQPAEE GPGGSKPMIE AGVLKNPDVD AIIGLHLWNN
LPLGTLGVRS GALMAASERF NCTILGKGGH GAMPHQTIDS IVVAAQVINA LQTIVSRNIS
PIDSAVVTIG QLNAGRAFNV IANTARMAGT VRYFNLDYQN YFSKQMEQII SGICASYGAN
YELNYQPLYP PLINNPKVTD IVRSVAELIV ETPAGVIPEC QTMGAEDMSF FLQEVPGCYF
FLGSANSEKG LAYPHHHPRF DFDETALGIG VEMFIRCTEK FSIQE