| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1817 |
|---|
| Symbol | |
|---|
| ID | 4244531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 2773777 |
|---|
| End bp | 2774766 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638106939 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_721547 |
|---|
| Protein GI | 113475486 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.442816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00257504 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA TAGGCGTTTC TATAATTGGA AGTGGTTCTG CAATACCAAA AACATCTCTA
GATAATCAAC AATTATCCCA AATAGTAGAG ACTTCTGACG AATGGATCAT TTCTCGCACT
GGAATTAATA AGCGACAGCT AGTAGATACA ACAGAATCAT TATGTAGCCT TGCTACTCAA
GCATCTCTAG CAGCTCTTAA CCAAGCAAAT ATTACTCCTA AAGATATTGA CCTAATTATT
CTGGCTACAT CTACTCCTGA TGACTTATTT GGTACTGCAT GTAAAATTCA ATGGGAGTTG
GGCGCACAGA AAGCAGTTGC TTTTGACATA ACTGTGGCTT GTTCTGGTTT TCTCTTTGCT
CTGGTTACAG GAGCGCAATT TATTCGTAAT GGAGTTTATC AAAATGTTTT GTTAATTGGG
GCAGATATTC TCTCGCGTTG GGTAGACTGG GAAGACCGAC GGACTTGTGT TTTATTTGGA
GATGGGGCAG GGGCAGTACT TTTACAAGCT TCAGAAAGCG ATCGCCTGCT GGGTTTTGAA
CTTGGTAGTG ATGGTAGTCA AAATAGCTGT TTAAGTCTTT CTTACCAACC CCAAGAAAAG
AGAATAATTG AGGGAGTAAC TGTTAGTCAA GGTACTTATC AACCAATAGC TATGAATGGT
AAAGAAGTCT ATCGTTTTGT AGTACAAAAA GTACCGGAAG CTATAGAAAA AGCTTTATTA
AAAGCTAATA TTGATATTGA TAAACTTGAC TGGTTGCTAT TACACCAAGC TAACCAAAGA
ATCCTTGATG CTGTTGCTAA TAGATTGAAT ATTCCACCAG AAAAAGTTAT TAGTAATCTA
CGAAATTATG GCAATACTTC TGCTGCTTCT ATACCGCTAG CTTTAGATGA AGTTGTTAGG
GAAGGACTTG TTAAATCAGG AGACATTATT GCTGCTTCTG GCTTTGGGGC TGGATTAAGT
TGGGGTGCAG TAATTTTTCA ATGGAACTGA
|
|---|
| Protein sequence | MTNIGVSIIG SGSAIPKTSL DNQQLSQIVE TSDEWIISRT GINKRQLVDT TESLCSLATQ
ASLAALNQAN ITPKDIDLII LATSTPDDLF GTACKIQWEL GAQKAVAFDI TVACSGFLFA
LVTGAQFIRN GVYQNVLLIG ADILSRWVDW EDRRTCVLFG DGAGAVLLQA SESDRLLGFE
LGSDGSQNSC LSLSYQPQEK RIIEGVTVSQ GTYQPIAMNG KEVYRFVVQK VPEAIEKALL
KANIDIDKLD WLLLHQANQR ILDAVANRLN IPPEKVISNL RNYGNTSAAS IPLALDEVVR
EGLVKSGDII AASGFGAGLS WGAVIFQWN
|
|---|
| |