Gene Tery_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1806 
Symbol 
ID4244520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2754328 
End bp2755920 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content36% 
IMG OID638106928 
Productmethionyl-tRNA synthetase 
Protein accessionYP_721536 
Protein GI113475475 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.79293e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAACA TGTATACAGA TAAAAACACT TTTGCAATTA CAACTCCCCT TTACTATGTT 
AACGATTTAC CACATATAGG TAGTGCTTAT ACAACTATTG CTGCTGATAC GTTAGCTCGT
TTTCAAAGGC TACAAGGTAG ATCGGTGTTG ATGATTACTG GTACAGATGA GCATGGCCAG
AAAATTCAAA GAACAGCTGA AAATAAAGGA AGAAACCCTA AAGAACACTG TGACTCAGTA
GTTAGAGGAT TTGAATCTCT TTGGGAACAA CTAAATATTC AATATGACCG TTTTATTCGT
ACTACTGCAC CTAACCACGA AAAAATTGTC AAAGAATTTT TCCAAAGAGT TTGGGAAAAA
GAGGATATCT ACTTAAGTCA GCAAAAAGGA TGGTATTGCG TATCTTGTGA GGAATTTAAA
GAAGAGCGGG AACTTACCGA AGATAAACAT TGTGTTATTC ATACCAACCA AAAAGTAGAA
TGGCGCGATG AGCAGAACTA TTTCTTTCGT CTCTCCAGGT ATCAGGAACG ACTACAAGCT
TTCTACCAAG ATAGGCAGGA ATTTATTCAA CCCCAAAGCC GTAGGAATGA AGTCTTAAGT
TTTGTAAACC AAGGATTGCA AGACTTCTCA ATCTCTAGAG TTAATGTGGA TTGGGCTTTT
AAACTACCTG TTGATTCTAG TCATACTATC TATGTTTGGT TTGATGCTCT ATTAGGTTAT
GTTACAGCCC TTTTAGATCC TGATAGTGAA CCAACTCTAG AGAATGCTTT ATCGAAATGG
TGGCCGATTA ATTTGCACCT AATTGGGAAA GATATATTAC GCTTCCATGC TGTTTATTGG
CCAGCAATGC TAATGTCAGC AGATTTGCCT CTACCTGAAC GTGTATTTGG ACATGGATTT
CTAACTAAAG ATGGGAAGAA GATGGGTAAA TCCCTAAATA ACACTTTAGA TCCTTTTGAA
TTAATCCAAA AATACGGGTC TGACGCAGTT CGTTACTATT TTCTCAAAGA AATCGAATTT
GGAGTTGATG GAGATTTTAA TGAAAACCGC TTTATCAATG TACTAAATGC TGACTTAGCA
AACGACTTAG GTAATTTACT AAATCGTACT CTGAAAATGG CTCATAAATA CTTCAATGGT
CAAATTCCTA AAATTAATGT TCAGGAGGTA GAAGTTACCC ATCCACTCAA AAAAATAGGC
ATGGGTTTGG GTGAAAAAGT TACCCAAGCT TACACTTCTT TAGACTTTAG TCAAGTTTGT
GAAGCTGTAT TAATTTTAGT CAGAACTGGC AATAAATATA TAGACGAAAC TGCTCCATGG
AGTTTATATA AACAAGGCCA ATTAGAAGCC TTAACAGAAG TTTTATATTC TGTGTTGGAG
TCTGTTAGAT TAGTGGCCTA TCTTTTGTCA CCAATTATTC CCAATATTAG CAATGCTATC
TATCAACAAC TAGGTTTCTC AAATAACTTT AATGATAAAT CAGCAATTAA TAGTTCAGAA
ACTTTTGTGA AACAAGTAAG TTGGGGAGCT TTACCAGGAA ATCAACTTCT AGGGCAACCT
CAACCTATTT TTCAAAGAAT AGATATGATA TAA
 
Protein sequence
MKNMYTDKNT FAITTPLYYV NDLPHIGSAY TTIAADTLAR FQRLQGRSVL MITGTDEHGQ 
KIQRTAENKG RNPKEHCDSV VRGFESLWEQ LNIQYDRFIR TTAPNHEKIV KEFFQRVWEK
EDIYLSQQKG WYCVSCEEFK EERELTEDKH CVIHTNQKVE WRDEQNYFFR LSRYQERLQA
FYQDRQEFIQ PQSRRNEVLS FVNQGLQDFS ISRVNVDWAF KLPVDSSHTI YVWFDALLGY
VTALLDPDSE PTLENALSKW WPINLHLIGK DILRFHAVYW PAMLMSADLP LPERVFGHGF
LTKDGKKMGK SLNNTLDPFE LIQKYGSDAV RYYFLKEIEF GVDGDFNENR FINVLNADLA
NDLGNLLNRT LKMAHKYFNG QIPKINVQEV EVTHPLKKIG MGLGEKVTQA YTSLDFSQVC
EAVLILVRTG NKYIDETAPW SLYKQGQLEA LTEVLYSVLE SVRLVAYLLS PIIPNISNAI
YQQLGFSNNF NDKSAINSSE TFVKQVSWGA LPGNQLLGQP QPIFQRIDMI