Gene Tery_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1725 
SymbolrecF 
ID4243324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2623272 
End bp2624444 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content39% 
IMG OID638106852 
Productrecombination protein F 
Protein accessionYP_721461 
Protein GI113475400 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGA AACATTTACA TTTACGACAG TTTAGAAACT ATCGAGACCA GCAAGTTAAA 
TTTGATGGTG CTAAAACAAT TTTGCTTGGA GATAATGCTC AAGGCAAATC TAATTTACTA
GAGTCAGTTG AGTTACTTTC TACTCTTAAG TCTCACCGAG CAATTCGCGA TCGCGATTTA
ATTCTAGATA GTAAACAAGC AAGTAAAATT CAAGCATCTT TAGAAAGACA ACTGGGAAAT
ATTGACTTGG CTCTAACTCT GCGGAGTCAA GGTAAACGCA CTGTAGCAGT TAACGGAGAA
ACTATTAGTC GCCATTTAGA TTTTTTAAGT ATTTTGAATG TAGTTCATTT TTCTAGTCTA
GATTTAGATT TAGTTAGAGG TGGGCCAGAA GTACGGCGCT ATTGGTTAGA TAGACTTTTG
GTACAACTAG AACCTGTCTA TGCTCACATT CTGCTACAGT ATAATCAAGT TCTCCGTCAG
CGAAATGCTC TGTTAAAGAA AATTCGCCAA CAAAAGATGG CTGCAGAAAC TACTGGTTCA
TCACCTTCTA TTCTGACTCA GGAGTTGGCC TTGTGGGATG CTCAGTTGGC AACTACTGGG
TCTCGAGTGA TTCGACGACG ACAGCGACTT TTGCAGAAGT TGGCACCTCT AGCTGGTGAG
TGGCATTGTG CTATTAGTGG GAGTATGGAA GTTTTCAAAA TGGAATATTT AGCAAATGTA
ATTGTTGATA GTAACGAGTT AATTATTCAG GATAGTTTGG AAGGAGTACG TCAAGCTTTT
TTGGAGAAAA TTAAAGTCCG GGCGATCGCT GAACAATATC AAGGTACTAC GGTGGTAGGT
CCTCATCGGG ATGATGTAAT TTTTACTATT AATGATACTC CCGCACGACA ATATGGTTCT
CAGGGTCAGC AGCGCACTTT GGTGTTAGCT TTGAAGTTGG CTGAATTACA ACTTATTGAA
GAAGTGGTGC AGGAACCACC TTTGTTGTTG TTGGATGATG TTTTGGCAGA GTTAGATCTC
CATCGCCAAA ATCAGTTGTT AGAAGCAATT AGTAATCGTT TTCAAACTTT GATTACTACT
ACTCATTTGG GGTGTTTTGA TGGTCAGTGG TTACAGGATA CTCAAATTCT TTCGGTCAAG
TCGGGAAATA TTAGTTCTTT TTTAGATTTT TAG
 
Protein sequence
MYLKHLHLRQ FRNYRDQQVK FDGAKTILLG DNAQGKSNLL ESVELLSTLK SHRAIRDRDL 
ILDSKQASKI QASLERQLGN IDLALTLRSQ GKRTVAVNGE TISRHLDFLS ILNVVHFSSL
DLDLVRGGPE VRRYWLDRLL VQLEPVYAHI LLQYNQVLRQ RNALLKKIRQ QKMAAETTGS
SPSILTQELA LWDAQLATTG SRVIRRRQRL LQKLAPLAGE WHCAISGSME VFKMEYLANV
IVDSNELIIQ DSLEGVRQAF LEKIKVRAIA EQYQGTTVVG PHRDDVIFTI NDTPARQYGS
QGQQRTLVLA LKLAELQLIE EVVQEPPLLL LDDVLAELDL HRQNQLLEAI SNRFQTLITT
THLGCFDGQW LQDTQILSVK SGNISSFLDF