Gene Tery_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1577 
Symbol 
ID4242726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2411651 
End bp2412274 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content36% 
IMG OID638106720 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_721330 
Protein GI113475269 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.14601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.882306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTAG CGCAAGGAGT TCAATTCGTT TCATTTGTTA TATTAGCTGT AATGATGATT 
GCGGCTGCTT TGGGAGTAGT ATTATTTTCT AATATTGTCC ACTCAGCGTT TTTGCTGGGT
GGAGTATTTA TGAGCATTTC TGGTTTATAT CTTTTGTTAA ATGCTGACTT TGTAGCTACT
GCCCAGGTTT TGATTTATGT TGGGGCTGTT AATGTCCTGA TTTTATTTGC GATTATGCTT
GTAAACAAAC GAGAAGATTT TAAAGCTTTG CCTAATGCTT GGTTTAGAAA GGTAGCTACA
GGTTTAGTTT GTTTTGGTTT GTTTGCTTTA CTGAGTACAA TGGTATTGTC TAGTTCCTGG
TCAATTCCTG TTGTTGGAAA TGCTACTAGA GAAAGTTCAA TTGTGTTAAT TGGTAAACAC
TTTTTTACAG ATTTTTTACT CCCTTTTGAA CTTGCTTCTG TGTGTTTGTT AATAGCAATG
GTGGGAGCTA TTATTTTAGC TCGTCGAGAT ATTTTGCCTG ATGAAGTACC AACTAATGTA
TCTCAAACAC CTGTTTTAAG TTTGCCAGAA CGTCCTCGTG AATTAGTTTC AAGTCTTGGT
GAAAGTTCTG CTCAAATCAA ATAG
 
Protein sequence
MDLAQGVQFV SFVILAVMMI AAALGVVLFS NIVHSAFLLG GVFMSISGLY LLLNADFVAT 
AQVLIYVGAV NVLILFAIML VNKREDFKAL PNAWFRKVAT GLVCFGLFAL LSTMVLSSSW
SIPVVGNATR ESSIVLIGKH FFTDFLLPFE LASVCLLIAM VGAIILARRD ILPDEVPTNV
SQTPVLSLPE RPRELVSSLG ESSAQIK