Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1523 |
Symbol | |
ID | 4241710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2313012 |
End bp | 2314022 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638106670 |
Product | anti-sigma-factor antagonist and sugar transfersase |
Protein accession | YP_721280 |
Protein GI | 113475219 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.229071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0638325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGCA AAATATCAGA AACATATTCA AAAAGAGATA TAGAAGTAAC TTTTAGGGAA AAAATTCCTG TGATTAATTT GCCTCTTCGT TTTACTGTCT CAGAGGCAAA ATTATTTAAG CTAACTTGCC AAGAACTTTT CTCTCAAGAG AAGACTACAA GTAAGATTAT TATTGATTTT AGTCAAACTA ATTTTATGGA TAGTTGTGGT GTTGGCTCTT TGGTGACAAA TCTCAAGATA GCAAGGAAAA AAGATATAGA TTTTATTCTT GATAATGTTA ATTCTCAGGT GATGAGTATA TTTTACCTAA CTGAATTAGA TAAAATTTTT ACTATTGAAC AAACTAAACA AACAGAGATT AAAGGTAGTT GGAAACCTGA AGAAAATCAA CTTCCTGTTA CTCATTCTTC TATTAAATCT TTGGTAAAAC GCTTAATTGA TATTGTTGGC GCTTTGGTAG GATTACTTAT TACAGGTATT TTGTTTATAC CAATAGCTAT TGCTATTAAG TTTGATAGTC CTGGTCCGAT ATTTTTTTGT CAAATACGAT GTGGTTGGAT GGGAAGGCAT TTTCGAATGT GGAAATTTCG ATCTATGTGT GAAGATGCAG AGCAACTTAA GGGTCAAATT AAAAATCAAG CTCAAGGTGC AATTTTTAAG AATGAAAATG ATTCAAGAAT TACTAAAGTT GGTAGCTTTT TGAGGCGAAA GAGTTTGGAT GAATTACCTC AGTTTTGGAA TGTATTAATA GGAGATATGA GTTTAGTTGG AACTAGACCT CCAACTCCTG ATGAAGTAGA ACGTTATGAA ATTCCTCAAT GGCAACGTTT AGATGTTAAA CCTGGCATGA CAGGAGAATG GCAAGTTAAT GGTCGTTCTC AAGTGAAAAA TTTTGAAGAT ATTATTAGGT TGGACTTAAA GTACCAAAAG AATTGGAGTC TAATGTATGA TATAAAGTTA ATTATTAGGA CTGTAGTAAT TCTATTCAAG AAAAGTAGTG GGGCCTACTA G
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Protein sequence | MVSKISETYS KRDIEVTFRE KIPVINLPLR FTVSEAKLFK LTCQELFSQE KTTSKIIIDF SQTNFMDSCG VGSLVTNLKI ARKKDIDFIL DNVNSQVMSI FYLTELDKIF TIEQTKQTEI KGSWKPEENQ LPVTHSSIKS LVKRLIDIVG ALVGLLITGI LFIPIAIAIK FDSPGPIFFC QIRCGWMGRH FRMWKFRSMC EDAEQLKGQI KNQAQGAIFK NENDSRITKV GSFLRRKSLD ELPQFWNVLI GDMSLVGTRP PTPDEVERYE IPQWQRLDVK PGMTGEWQVN GRSQVKNFED IIRLDLKYQK NWSLMYDIKL IIRTVVILFK KSSGAY
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