Gene Tery_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1514 
Symbol 
ID4242974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2300636 
End bp2301247 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content39% 
IMG OID638106662 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_721272 
Protein GI113475211 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0626056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCAA CCGTTATTGA ACAATCTGGC CGTGGCGAAA GAGCCTTCGA TATTTACTCT 
CGACTATTAC GCGATCGCAT AATCTATCTA GGAGAAGCGA TAGACTCTGA ATTGGCCAAC
CTAATCGTAG GCCAATTATT ATATTTAGAC TCAGAAGACC CAGAAAAAGA TATTTATCTC
TATATAAACT CTCCTGGCGG TTCTGTTAGT GCCGGGATGG GTATTTATGA CACCATGAGA
CACGTTCGAC CTGATGTCTG TACTATTTGT ATGGGAATAG CTGCTAGTAT GGGAGCATTT
CTTCTGAGTG GAGGAACAAA AGGCAAAAGA ATGAGTCTAC CCCACTCCCG AATTATGATT
CATCAACCAT TAGGTGGTGC CCAAGGTCAA GCCACAGATA TTGAAATCCA AGCAAAAGAG
ATTTTATACC TCAAAAAATA TCTTAATGAA TGTTTAGCAG AACACACAGG CCAATCTATA
GAAAAAATTA CCGAAGATAC AGAAAGAGAC TTTTTTATGT CAGCCACAGA AGCAATGGAA
TACGGAATAA TAGACCAAGT TTATAACCGT AATCCCTCTA ATTCTCAACC TATATCTCCT
ATTAAGGAAT AA
 
Protein sequence
MIPTVIEQSG RGERAFDIYS RLLRDRIIYL GEAIDSELAN LIVGQLLYLD SEDPEKDIYL 
YINSPGGSVS AGMGIYDTMR HVRPDVCTIC MGIAASMGAF LLSGGTKGKR MSLPHSRIMI
HQPLGGAQGQ ATDIEIQAKE ILYLKKYLNE CLAEHTGQSI EKITEDTERD FFMSATEAME
YGIIDQVYNR NPSNSQPISP IKE