Gene Tery_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1506 
SymbolaroK 
ID4242966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2290170 
End bp2290724 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content35% 
IMG OID638106655 
Productshikimate kinase 
Protein accessionYP_721265 
Protein GI113475204 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.494789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA GTAATAGGAA ATTATTACAG GGAGTAAATC TTTATCTAGT GGGGATGATG 
GGTGCTGGTA AAACAACTGT GGGACATTTA CTAGCCCAAC ACTTAGGATA TAGTTTTCTT
GATACAGATA ATTTAATTAC TCAAGCTGCT GGCAAGTCAA TTAACGAAAT TTTTGCCACT
GAAGGTGAAG CAGCTTTTCG GGAGTTGGAA ACAAACATAT TATCAGAAAT ATCTAGTTAC
AAAAATTTGA CTATTGCTAC AGGTGGTGGT ATAGTTATAA GTCGATTTAA CTGGAGTTAT
TTACGGCATG GCATAGTAGT TTGGTTAGAT GTGCCAGTAG AAGTTTTATA TAGTCGCTTG
CAAGGCGATC AGACTAGACC TTTAATTCAA AATAGTAACC CTTTAGCTAG ACTTCAGGCT
ATTTTAGAGG AAAGAAGACC GTTTTATAAT TGTGCAGATG TTCATGTTAA TGTTGATATT
CAAGATACAC CTCAACAAGT GACAATTTTA ACCTTGGAAG AAATAAAAAA AGTGCTAAAG
TCATCTCAGA GGTAG
 
Protein sequence
MDISNRKLLQ GVNLYLVGMM GAGKTTVGHL LAQHLGYSFL DTDNLITQAA GKSINEIFAT 
EGEAAFRELE TNILSEISSY KNLTIATGGG IVISRFNWSY LRHGIVVWLD VPVEVLYSRL
QGDQTRPLIQ NSNPLARLQA ILEERRPFYN CADVHVNVDI QDTPQQVTIL TLEEIKKVLK
SSQR