Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1506 |
Symbol | aroK |
ID | 4242966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 2290170 |
End bp | 2290724 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638106655 |
Product | shikimate kinase |
Protein accession | YP_721265 |
Protein GI | 113475204 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.494789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTA GTAATAGGAA ATTATTACAG GGAGTAAATC TTTATCTAGT GGGGATGATG GGTGCTGGTA AAACAACTGT GGGACATTTA CTAGCCCAAC ACTTAGGATA TAGTTTTCTT GATACAGATA ATTTAATTAC TCAAGCTGCT GGCAAGTCAA TTAACGAAAT TTTTGCCACT GAAGGTGAAG CAGCTTTTCG GGAGTTGGAA ACAAACATAT TATCAGAAAT ATCTAGTTAC AAAAATTTGA CTATTGCTAC AGGTGGTGGT ATAGTTATAA GTCGATTTAA CTGGAGTTAT TTACGGCATG GCATAGTAGT TTGGTTAGAT GTGCCAGTAG AAGTTTTATA TAGTCGCTTG CAAGGCGATC AGACTAGACC TTTAATTCAA AATAGTAACC CTTTAGCTAG ACTTCAGGCT ATTTTAGAGG AAAGAAGACC GTTTTATAAT TGTGCAGATG TTCATGTTAA TGTTGATATT CAAGATACAC CTCAACAAGT GACAATTTTA ACCTTGGAAG AAATAAAAAA AGTGCTAAAG TCATCTCAGA GGTAG
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Protein sequence | MDISNRKLLQ GVNLYLVGMM GAGKTTVGHL LAQHLGYSFL DTDNLITQAA GKSINEIFAT EGEAAFRELE TNILSEISSY KNLTIATGGG IVISRFNWSY LRHGIVVWLD VPVEVLYSRL QGDQTRPLIQ NSNPLARLQA ILEERRPFYN CADVHVNVDI QDTPQQVTIL TLEEIKKVLK SSQR
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