| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1460 |
|---|
| Symbol | rplI |
|---|
| ID | 4241666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 2209262 |
|---|
| End bp | 2209720 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638106613 |
|---|
| Product | 50S ribosomal protein L9 |
|---|
| Protein accession | YP_721223 |
|---|
| Protein GI | 113475162 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0890745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAA AATTACAGGT AGTATTGAAT AAAGATGTTA ACAAGTTAGG AAAATCAGGA
GATGTTGTAG ATGTAGCTCC TGGTTATGCC CGTAACTATT TGATTCCGAA TAAAATTGCT
TTTCGTACTA CTCCAGGTGT TCTTAAACAA GTAGAACGTC GTCAAGAACA AGAGCGGCAA
AGACAAATAG AATTAAAGCA GGGAGCATTA GCTCAAAAGA CTGCTTTGGA AACAGTTGGT
CGCTTTAAAA TTGCCAAACA AGTAGGTGAA AATGATGCAA TTTTTGGTAC AGTTACTGAT
AGAGAATTAG TAGAAGTAAT TAAGGAAAGT ACAGGTCAAG AAATTGATAG ACGCGGTGTT
ACTTTACCAG AGATTAGCAA AATTGGTTTT TACAAAGCTG AAATTAAACT TCATCCAGAG
GTAATTGCTG AAGTGGAAAT TCAAGTAGTA GGTCATTAA
|
|---|
| Protein sequence | MAKKLQVVLN KDVNKLGKSG DVVDVAPGYA RNYLIPNKIA FRTTPGVLKQ VERRQEQERQ
RQIELKQGAL AQKTALETVG RFKIAKQVGE NDAIFGTVTD RELVEVIKES TGQEIDRRGV
TLPEISKIGF YKAEIKLHPE VIAEVEIQVV GH
|
|---|
| |