Gene Tery_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1421 
Symbol 
ID4243092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2151480 
End bp2154209 
Gene Length2730 bp 
Protein Length909 aa 
Translation table11 
GC content42% 
IMG OID638106579 
Productpolynucleotide adenylyltransferase region 
Protein accessionYP_721190 
Protein GI113475129 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTAA TTCTATGCCA CACAACAGCA GACTTTGACG GTCTCGGCGC CGCCGTCGGA 
CTCACCCACC TCCACCCAGG TAGTCGCCTC CTACTAACTG GCGGTTGCCA CCCCACCGTC
AAAGAATTCC TGGCCCTCCA TCGAGACGAA TTTGCCATCA TCGAGCGCCG CTCCGTCAAC
CCAGAAAAAA TCAGATCTAT ATATATAGTA GATACCCAAA CACGCTCCCG ACTTGGAAAA
ACCGCCGAAT GGTTAGACTT ACCCCACCTA TCAGAAATTG TCATCTACGA CCATCACTGT
GAAACTCAAA CCGACATTCC AGCCACCCAA ACTTATATAG AAGCAGTTGG AGCCAGTACA
ACCCTAATAG TAGAAAAACT TCAGACTCTA AAAAATAATT CTTCCCCGAT CTTAACTCCA
GCAGAAGCAA CAATTATGGC TCTTGGTATT CATCTTGATA CTGGTTCACT AACTTTTGAC
AATACAACAC CACGAGACGC AACAGCTTTA GCATGGTTAA TGCAGCAAGG GGCAAGTTTA
TCCGTCATCG GCGAATATGT AGAACCAGGC CTATCACCCC AACTCCAAGA TTTATTGAAA
CTAGCTCTAG AAAACTTACA ACGTTCCACC GTGAGAACCT ATCAAATAGG ATGGATACTA
TTAAACACTG ATCAACATGT TCGTGGTTTA TCCAGTCTAG CTTCTAGCTT AATTGACCTC
ACAGAAATAG ATGCTCTCTT ACTAGCTCAT ACCCACTCCC TCAAAAACAC AACAGAAAAA
AGCCTAAATA TCATCGGGCG ATCGCGCATC CCAGAAACCA ACTTCAACCA ACTATTCCAA
CCTCTAGGGG GTGGTGGTCA TAGCCGAGCA GCAGCAGTTA GTCGCCGAGA CACCAACCCC
CAAGCAACAT TAGAAAAACT CGTAGACCAA CTCAAAAATC AAATTCCTCA CCCACCGACT
GCTAAAGATT TAATGTCATC TCCAGTTCGG ACTATTCCTC CAGAGACATC CATAGAAGAA
GCTCACCGAA TACTACTACG CTATAACCAT TCTGGTTTAT CAGTAGTAGA CTCATCTGGA
AAATTAGTCG GAATTATTTC TCGGCGAGAT ATCGACATTG CTCTCCATCA TGGTTTTAGC
CATGCTCCAG TTAAAGGTTA CATGACACCC CAACTTAAAA CTATTTCCCC AGAAACAAAT
CTCCCAGAAA TTGAAAGGTT AATGGTTACT TACGATATCG GGCGGTTACC TGTCTTAGAA
AATAATTCCT TAGTCGGAAT AGTTACCCGC ACCGACGTTT TACGGGAATT GCATCAACAA
CAACGTCCCC AATATCAACA ACTAGGTTGC ATTCCTGGTG AAACTTGTAA ATCAGTTGCC
GAACTTCTAC AAGAACGTCT CGCACCCCAA CTATGGCAAC TTCTCAGTTG TGTTGCTGAG
TTAGCAGAAA AACGAGGTTG GCAACTATAC CTGATCGGAG GAGGAGTCAG AGATTTACTG
TTATCAGAAT TTGACGAAAC TCTATTATTA ACAGATATAG ACTTAGTTGT AGATACTTGC
CGCTCTAAGT CAGTAGCTAA TGCTCCAGCG GTAAACTTGG GAAAAGCACT GCAAAAAATT
TACCCAACAG CACGTTTAGA AATTCATGGT CAATTTCAAA CTGCTGCTCT TCTCTGGCAC
CATGATTTAG TTTTAGACTC CCTTTGGATA GATATTGCTA CTGCTCGTAC AGAATTTTAT
CCCTATCCAG CAGCTAACCC AGAAGTTGAG GTAAGTTCAA TTCGCCAAGA TCTATATCGT
CGAGATTTTA CTATTAATGC TTTAGCAGCA CGGCTTACTA AACCAGGCAC TGGAGAATTA
CTTGATTTTT TTGGTGGGTT ATTAGATTTG CAACAGAAAC AAATTCGGGT ATTACACGCT
AATAGTTTTA TTGAAGACCC GACTCGTATT TATCGGGCAG TCAGGTTTGC GGTAAGATTG
GGTTTTGAGA TCGAGTCAAA AACAGAGGAA TATATTCGTT ATGCAATTAA TAGTGGAGTA
TATGACCGCG AAAATGTTAA AAAGGGAGAA AAGAATAGAA GAGCGCCGGC TTTAGAAACT
CGACTCAAAA GTGAGTTGAA ATATATTTTG CAAGCTCCCT ACTGGAAACC TGCTTTAAGG
TTATTAGGAA ATTTGGGAGC GTTGCGTTGT ATTCATCGCA CCTTGGTGTT AGATAGGAAC
TTATGGCGAC AGGTGTGTCT ACTTGATAGG TGTTTACAAG GTTTTGATCC TGACAAGAAA
TTGTCTCATT GGCAAATGCG CTTAGAGGTT TTGATAGTTA GTTTAGAGTC TGGGTATCGG
AGTTTGGTTG GAAAAAATTT ACAGTTGTCT GTGGATAGTG TGAAGAGGTT GGAGGAGTTG
GAGTTGGCAA AAGTTATGGT TATGGAGAAT TTGCCAAAGT GTGATACTCC GAGTCAGGTG
GTGTGGTTGT TGAGGGAATA TGATTTAGGA ATGTTGATTT TGATTATTGT GCAATGTGAC
CGTTGGATGC GACGCCAAAT TTGGCAATAT TTGACTCAGT GGGCAAATGT TAAACCTGTT
TTTAATGGAA ATGATTTAAA ATTGATGGGG TATAAGCCGG GGCGTCAGTT TAAGTTGATG
TTGGATGATA TTTTGGCTGC GACTTTGGAT GGGAAGGTGA GCGATCGCTC TGAGGCTGAG
AAGTTTTTAG CTCAATATTA TCCTCAATAG
 
Protein sequence
MDLILCHTTA DFDGLGAAVG LTHLHPGSRL LLTGGCHPTV KEFLALHRDE FAIIERRSVN 
PEKIRSIYIV DTQTRSRLGK TAEWLDLPHL SEIVIYDHHC ETQTDIPATQ TYIEAVGAST
TLIVEKLQTL KNNSSPILTP AEATIMALGI HLDTGSLTFD NTTPRDATAL AWLMQQGASL
SVIGEYVEPG LSPQLQDLLK LALENLQRST VRTYQIGWIL LNTDQHVRGL SSLASSLIDL
TEIDALLLAH THSLKNTTEK SLNIIGRSRI PETNFNQLFQ PLGGGGHSRA AAVSRRDTNP
QATLEKLVDQ LKNQIPHPPT AKDLMSSPVR TIPPETSIEE AHRILLRYNH SGLSVVDSSG
KLVGIISRRD IDIALHHGFS HAPVKGYMTP QLKTISPETN LPEIERLMVT YDIGRLPVLE
NNSLVGIVTR TDVLRELHQQ QRPQYQQLGC IPGETCKSVA ELLQERLAPQ LWQLLSCVAE
LAEKRGWQLY LIGGGVRDLL LSEFDETLLL TDIDLVVDTC RSKSVANAPA VNLGKALQKI
YPTARLEIHG QFQTAALLWH HDLVLDSLWI DIATARTEFY PYPAANPEVE VSSIRQDLYR
RDFTINALAA RLTKPGTGEL LDFFGGLLDL QQKQIRVLHA NSFIEDPTRI YRAVRFAVRL
GFEIESKTEE YIRYAINSGV YDRENVKKGE KNRRAPALET RLKSELKYIL QAPYWKPALR
LLGNLGALRC IHRTLVLDRN LWRQVCLLDR CLQGFDPDKK LSHWQMRLEV LIVSLESGYR
SLVGKNLQLS VDSVKRLEEL ELAKVMVMEN LPKCDTPSQV VWLLREYDLG MLILIIVQCD
RWMRRQIWQY LTQWANVKPV FNGNDLKLMG YKPGRQFKLM LDDILAATLD GKVSDRSEAE
KFLAQYYPQ