Gene Tery_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1369 
Symbol 
ID4245469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2099242 
End bp2100564 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content40% 
IMG OID638106543 
ProductOrn/Lys/Arg decarboxylase, major region 
Protein accessionYP_721154 
Protein GI113475093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.572499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG TATCTTCTAC CTATAAGCTG ATTGCATCCC ACAATCAGGA TATTCAGATT 
AGCCTCTATA CTCCTGCTCA TCAAGGTATT AAAAGTAATG GTCATCGTCT GAGTGCAGAA
ATTTACCAAT ATGATGCACC ATTTCTGACT CGTCCTCGTA CTGAAAATAT AGAGAAGCAT
TTCTCTAAGC TGTATGGTAC AAAACATACT TTCTGGCTCA CAGCAGGAGG TAGTCAAGGA
GTTTTAACCA CTTGTGCTTT ACTAGGTACT CAGTATAAAA AAGTGGCGAT CGCCCTCAAT
AGTCATATTT CCACTATAAA CGGCATCATC TTAGCAGGAT TAGAGCCTTA TTTTATTGAT
TCTGAGTCGC TGATGCCTAC TACTGATGAG GTAATTACGG CTTTAGAAAC GAGTGGCGTA
TCAGCACTGT TACTAACTCA TCCAAGTTAT GAAGGGGTAA CTATCGAGCT TGCCACCATC
GCTAATTATT GTCAGAAGCA TGGGATAGCT CTAGCAGTAG ATGAAGCTCA CGGTAGTCAT
TTTCCCTTTC TTGACGAACA ATGGCAATCG GCAATTAGTG TTGGTGCAGA TATAGTTTCC
CATAGTATGC ACAAATATGC CGGAAGTTTA GTACAAACTG GTTTGTTACA TTTACCTAAA
TCTTCCCAGT TTAGCACCGA ACAAGTGATG GGGGTTTTAC CTTTGTTTGA AACTACTACC
CGCAGTAATT TGTTGATGCT GAGTCTTGAA GATGCTATTA AAAGGGGGTA TTCTGAATCA
GGCAAGGCTT TATTTGACAA AGCTATTCAA GAGTGCGACC TCCTGCGTAG TCAGTTAGAT
AGTTATGGTC AGGTTTTAAC TTACGATCCT CAAGTTACCG ATCCTCTGAA AATTTATTTA
AAGAGCGATC GCATGACAGG GGAAGAGTTA GCAGAATTTT TGTATGAATA TGGCATAGAT
GGGGAATTTG CAGGAGAGGA GGGATTATTA TTAATTTTCT CTTTTCATCA CAATCCACAG
GATTTCCAAT TTATGCGGGA AACTCTGGCT AAAGTTGTAG CAATTTTGAG GGAAAAACCC
ATAAAACAGA TTGTACCTGA CAGTTACTTT TCCCGTCGCC CTCAAATAAA TACTTTACCT
AAAGATGCTT TCTTTTGCCG GAAAGAAAAG TTACCCATTG GGGAAGTATT AGGTAAAATT
AGTAGTTGTT GGATTAAGAA AGTTCCCCCA GGGAGTCCGA TTTTGATACC AGGAGAAGAA
GTAACTAATT GGCACATAGA ACGTTTATCT CCTGATACTG TTGTTGAAGT AGTAGGTGCG
TAA
 
Protein sequence
MNQVSSTYKL IASHNQDIQI SLYTPAHQGI KSNGHRLSAE IYQYDAPFLT RPRTENIEKH 
FSKLYGTKHT FWLTAGGSQG VLTTCALLGT QYKKVAIALN SHISTINGII LAGLEPYFID
SESLMPTTDE VITALETSGV SALLLTHPSY EGVTIELATI ANYCQKHGIA LAVDEAHGSH
FPFLDEQWQS AISVGADIVS HSMHKYAGSL VQTGLLHLPK SSQFSTEQVM GVLPLFETTT
RSNLLMLSLE DAIKRGYSES GKALFDKAIQ ECDLLRSQLD SYGQVLTYDP QVTDPLKIYL
KSDRMTGEEL AEFLYEYGID GEFAGEEGLL LIFSFHHNPQ DFQFMRETLA KVVAILREKP
IKQIVPDSYF SRRPQINTLP KDAFFCRKEK LPIGEVLGKI SSCWIKKVPP GSPILIPGEE
VTNWHIERLS PDTVVEVVGA