| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1352 |
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| Symbol | |
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| ID | 4241849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2065274 |
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| End bp | 2068273 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638106527 |
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| Product | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters |
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| Protein accession | YP_721138 |
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| Protein GI | 113475077 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.897617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTC CTTCTTCGAC AATATCAAGA GTACAAGTAC AAGAATTTCT GGCAAATAAG
CCACCATTTA ACAAACTTTC AGAAAATGCT CTGAGAACTC AATTAGTGGA AAAGTGTCAA
CTTCTAGGTT ACCGTGCTGG CCAACCACTA TTTGAAAGGG AAAAAATGCC AAACCAGATA
GCAATTATTT ATCAGGGTCA GGCACGAGTA TTAGGTTATG AGGAGCGATC GCAACGTCAC
ATCAGTTTGC AATTAGCAGG ACCAGGAGAA ATTCTAGGTT GGGCCGGGTT GCTACGAGGG
ATGCCTTGTG AAACAGCACT CGCTTCCACA GACTTAATCG CTATTACTTT ACCAGCAGCA
GATTTTTTGG CAATACTAGA AGTAGAACCA GAATTTGGAG CAGTCTTTCT CGAAAGTCCA
GCAATAAGTG AAGTATTTGA ACTACTAAGC CAAGAATTTG ATAGAAGAGC TGAAGTAAAT
AATAACCTCA AACAACTAGC TCAAAATGTT GTCCAAAATA CTGTAGTAGT AAATCTACCG
AAAGGAGACC ACAAAACCAT AGAAATAGCT TCGATCCTCG ACAAAAAAAA AATATGGCTA
GTTAGTAGTG GGGTAGTAGG AGATTTTCCT TCAGGTTCTC AAGTAGTTTT GGATAGAGCT
GGAACAGGTA GGTCTATTAA AATAGAAGGG CCAAGAGGTG CAAGAATTAT CGGATTACCT
GAACAACAAG ATGAGGAACA AACAATAGAA AATTGGGCGG AAACTAGTCA ACTGGTACCC
TTGGATTTAT CTAAGGTTCC CCTAGCACCA GCACGTCCAT CAGAACCTAC TGTGGCTCAA
GATACTTCAT CAAAAAAGTA CCCAATTTTT CGAGCTAAAG GACAAATAGC AGCTCCTTTA
GCTTGCTTTC AGATGCTAGC CAAACATTTT GGCCTCAGGT TTCGCCGGGA CGTAATTCGT
CGAGTATTGG ATAATCAGAT CCGCACAGCA GGTAGAGTGT CTATGCAGGC TTGTGGGGCG
ATCGCTCAGA TGATGGGATT AACGGGTCAA CTAGCACAAG TGTCGGCATC AGCAGTGCCT
CGACTCAGAG CACCAGCTCT AGTTGAATGG CAAAATAGTT TTGGTATACT TTATAGTATT
ACAGAAAAAG AAATTGTCGT TGGGAGTCCA GAATCAGGAT TAAGTCGTCT CAAACCAGGT
GAGTTCCAGG AAATTTGGGG AGAGTCAGGA CAAATTCTAC TACTAGAAGC ACCAAAAACT
GAGCAGAAGG AACAGTTTAG TTTTTGGTGG TTTGTTCCTT CTTTGATGGA ACATCGCACA
GTATTTATTG AGGTTTTGAT TTCCTCATTT TTTGTACAGG TATTTGGCTT GGTCAACCCT
CTAATGACGA TGATTATCAT CGATAAAGTG ATGGGGCAAC GTAATATTGA GGCTTTGGAT
GTTCTGGGAA TCTTGATGTT ATTAGTGGCT CTATTTGAGG CTTTGTTGGG AGGTCTACGG
ACTTTCTTAT TTGTAGATAC TACTAACCGT ATAGATGTCA AACTTAGCTC AGAGGTAATT
GACCATTTAC TTCGTCTACC ACTCACTTAT TTTGATAATC GCCGGGTAGG TGATTTGGTA
GGTAGAATTG GAGAATTAGC TAATATTCGG AATTTTCTGA CAGGCACAGC CTTAACAGTG
GTTTTAGATG CGGTCTTCTC AGTAATTTAT GTTGCTGTAA TGTTGACTCT CAACCCATTA
ATGACGGCGG TTGCTTTGGC TGGAGTACCT TTCTTTGCTG GTATTATTTT AATTAACTCT
CCTATTGTCA GAAGGTTACT ACGGAAAAAG GCAGAACGTT ATGCAGATTC TCAGTCATAC
TTGGTAGAAG TACTAAATGG TGTGCAAACT GTTAAGGCGC AAAATTTAGA ATTGAAGTCT
CGTTGGGAAT GGTCATCCCG TTATACTAGA TTTATGACTG CTAGTTTTAA TACTGTTCTT
ACTCAAACTA CTTCTAGTTC TATTAGTACA TTTTTAAATA AACTTTCAGG ATTAGCGCTT
TTATGGGTTG GCGCTTATTT AGTTATTGAT GGTCAGTTAT CTGTAGGGGG ATTAATTGCT
TTCCGAATTA TTGCTGGTAA TGTGACAGGT TCATTGCTCC GTTTTGTTAG TGTTTGGCAA
AGTTTCCAAG AAGTAGGAAT GTCAATTGAA CGATTAAGAG ATGTTTTAGA TACTGAAGCG
GAAGTAGATG AGGAAGACCG GAATAATATT GATATGCCAC CAATTAATGG CAGTGTCAAA
TTTGAGGAAC TTTGCTTCAG GTTTACTCAA AGCGGACCTT TACAATTAGC AAATATAAAT
CTGGAATTTC CTGCTGGTCA TTTTGTGGGT ATTGTGGGGT TGAGTGGTTC CGGAAAAAGT
ACACTAATGA AGTTATTGCA ACGCTTATAT CCTCCACTTT CTGGTCGAAT TTTCATTGAT
GGATATGATA TTCAAAAGGT AGAACTATAC TCTTTACGCC GTCAAATTGG GGTGGTTTTA
CAAGATACTC TTCTGTTTAA TGGTACTGTT CAAGATAATA TTGCTTTGAC AAATCCAGAT
GCAACGACTG ATGAAATTAT TCGAGCCGCT AAGATAGCAG TTGCTCATGA TTTTATTATG
AATTTGCCTA GTGGTTATAA CACAATGGTG GGAGAAAGAG GAGCTTCTTT GTCAGGGGGT
CAAAGACAAA GAATTGCAAT TGCTCGGACA GTTCTACAAA ATCCCAAATT GTTGATATTA
GATGAAGCAA CTAGCGCTTT AGATTACAGT TCTGAACGTC AGGTTGGAGA GAATTTAGCT
GAGGCTTTTA CCAATACAAC AGTGTTTTTT ATTACTCACC GTTTAACAAC AGTAAAAAAT
GCTAATACTA TCATAATGAT GGATAAAGGT TCGGTGGTAG AGCAGGGAAC CCATGATGAA
TTAATGGGAG TAAAAGGGCG TTATTTCTGC CTTTATCAAC AACAAGAATC TCAACAATAA
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| Protein sequence | MATPSSTISR VQVQEFLANK PPFNKLSENA LRTQLVEKCQ LLGYRAGQPL FEREKMPNQI
AIIYQGQARV LGYEERSQRH ISLQLAGPGE ILGWAGLLRG MPCETALAST DLIAITLPAA
DFLAILEVEP EFGAVFLESP AISEVFELLS QEFDRRAEVN NNLKQLAQNV VQNTVVVNLP
KGDHKTIEIA SILDKKKIWL VSSGVVGDFP SGSQVVLDRA GTGRSIKIEG PRGARIIGLP
EQQDEEQTIE NWAETSQLVP LDLSKVPLAP ARPSEPTVAQ DTSSKKYPIF RAKGQIAAPL
ACFQMLAKHF GLRFRRDVIR RVLDNQIRTA GRVSMQACGA IAQMMGLTGQ LAQVSASAVP
RLRAPALVEW QNSFGILYSI TEKEIVVGSP ESGLSRLKPG EFQEIWGESG QILLLEAPKT
EQKEQFSFWW FVPSLMEHRT VFIEVLISSF FVQVFGLVNP LMTMIIIDKV MGQRNIEALD
VLGILMLLVA LFEALLGGLR TFLFVDTTNR IDVKLSSEVI DHLLRLPLTY FDNRRVGDLV
GRIGELANIR NFLTGTALTV VLDAVFSVIY VAVMLTLNPL MTAVALAGVP FFAGIILINS
PIVRRLLRKK AERYADSQSY LVEVLNGVQT VKAQNLELKS RWEWSSRYTR FMTASFNTVL
TQTTSSSIST FLNKLSGLAL LWVGAYLVID GQLSVGGLIA FRIIAGNVTG SLLRFVSVWQ
SFQEVGMSIE RLRDVLDTEA EVDEEDRNNI DMPPINGSVK FEELCFRFTQ SGPLQLANIN
LEFPAGHFVG IVGLSGSGKS TLMKLLQRLY PPLSGRIFID GYDIQKVELY SLRRQIGVVL
QDTLLFNGTV QDNIALTNPD ATTDEIIRAA KIAVAHDFIM NLPSGYNTMV GERGASLSGG
QRQRIAIART VLQNPKLLIL DEATSALDYS SERQVGENLA EAFTNTTVFF ITHRLTTVKN
ANTIIMMDKG SVVEQGTHDE LMGVKGRYFC LYQQQESQQ
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