| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1325 |
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| Symbol | |
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| ID | 4242785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2022108 |
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| End bp | 2023112 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638106508 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_721119 |
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| Protein GI | 113475058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.544118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.772005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTC TATCTCCTGA ATTAAAGAAA AAATTATCTA CTCCACTAAA AATTGGCAAC
TTTGAAGTTA AAAGTCGTGT CCTTCAATCA CCATTATCAG GAGTAACAGA CTTAGTATTT
CGTCGTCTAG TACGTCGTCA TGCTCCAGAG TCAATGATGT ACACTGAAAT GGTAAATGCT
ACAGGGTTAC ATTATGTAAA AGAATTACCT CAAATAATGG AGGTTGATAA TAATGAGCGA
CCAATAAGTA TTCAATTATT TGATTGTCGT CCAGATTTCT TAGCAGAAGC AGCAGAAATG
GCTGTAAAAG AAGGAGCTGA TACTGTTGAT ATTAATATGG GTTGTCCTGT TAATAAAATC
ACAAAAAACG GCGGGGGTTC TTCATTATTA AGACAACCAG AATTAGCTGG AGAAATTGTT
AGTAAAGTTG TTAAAGCTGT TCCTATTCCT GTTACTGTAA AAACAAGAAT TGGTTGGAGT
AATCAAGAAA TTAATATTCT CGAATTTGCT CAAAGAATGG AAGATGCAGG TGCCCAAATG
TTAACTTTAC ATGGTCGGAC TCGTGCCCAA GGATATAATG GCCCGGCCAG ATGGGAATGG
ATTACAAAAG TTAAGGAAAT ACTTTCTATC CCAGTTATTG CTAATGGAGA TATTTTCTCT
GTTGATGCTG CAATACGTTG TTTGGAGGAA ACTAGAGCAG ATGGAGTAAT GTGCTCCCGT
GGAACTTTAG GTTATCCTTT TTTAGTGGGA GAAATTGATT ATTTTTTGAA AAATGGTGTA
AAAAAAGTAT CACCAACTGC AGCAGAAAAA CTGGAGTGTG CTAAAGAGCA TTTACGGGCA
CTATGGGAAT ATAAAGGCGA TCGCGGGATT CGTCAAGCTC GTAAGCATTT GACTTGGTAT
TCTAAGGGTT TTCCAGGAGC AGGTGAGTTG CGGGGTCAGT TGGCAAAAGT ACAAACTGTA
GCGCAAGGTT GTGATTTGAT TGATAAGGTA ATTGAAAATT TATAG
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| Protein sequence | MTILSPELKK KLSTPLKIGN FEVKSRVLQS PLSGVTDLVF RRLVRRHAPE SMMYTEMVNA
TGLHYVKELP QIMEVDNNER PISIQLFDCR PDFLAEAAEM AVKEGADTVD INMGCPVNKI
TKNGGGSSLL RQPELAGEIV SKVVKAVPIP VTVKTRIGWS NQEINILEFA QRMEDAGAQM
LTLHGRTRAQ GYNGPARWEW ITKVKEILSI PVIANGDIFS VDAAIRCLEE TRADGVMCSR
GTLGYPFLVG EIDYFLKNGV KKVSPTAAEK LECAKEHLRA LWEYKGDRGI RQARKHLTWY
SKGFPGAGEL RGQLAKVQTV AQGCDLIDKV IENL
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