Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1323 |
Symbol | |
ID | 4242474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2017345 |
End bp | 2018265 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638106506 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_721117 |
Protein GI | 113475056 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.46051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAT TAAAAGGACG AGATTTATTA AGTCTGGCAA ACTTGAATTC TGAAGAATTA AAAGAAATTT TACAATTAGC AGCCCAACTA AAATCGGGTG AAATAAATCT TAAATGTAAT AAAGTACTAG GATTATTATT TTCTAAAGCA TCTACAAGAA CCAGGGTAAG TTTTACCGTA GCAATGTATC AATTGGGAGG TCAAGTTATT GATTTGAATC CTAATGTTAC TCAGGTTAGT CGGGGAGAAA GTTTGGAAGA TACTGCTAGG GTTTTAGACG GATATTTAGA TATTTTAGCA ATTCGTACTT TTGAACAAAA AGACTTAGAA AGTTTTGCAA ATTATGCAAA AATTCCTGTT ATTAATGCTC TTACAGATAG GGAACATCCT TGTCAGATAT TAGCTGATTT ATTAACTGTT CAAGAAAATT TTGGCAAGCT AGATGGAATA ACTTTAAGTT ATTTTGGTGA TGGTAATAAT GTGGCAAATT CTTTACTATT AGGTTGTGCA ATGGTAGGAA TAAATGTCAG GATAGCAACT CCAGAAAATT ATCTGCCAAA TAAGGAAATT GTGGAACAAG CAAAGACTAT TGCTAATGGT AAAAGTGAAG TTCTAGTTAC TCAAGACCCC CAGGTAGCAG TTAAGGATAG TCAAGTGCTT TATACTGATG TTTGGGCAAG CATGGGACAA GAACAGGAAG CGAATAATCG AATTCCTATT TTTCAGCCTT ATCAAGTTAA TGAAAAGTTG GTAGAAAGTG CGGCAGATGA TGTAATAATT TTACATTGTT TACCAGCACA TAGGGATGAG GAAATTACTG ATGCAGTAAT AGAAGGAAAG AAATCACTAG TTTGGGAGCA AGCAGAAAAT CGAATGCACG CTCAAAAAGC TTTATTGATA AGTATCTTAG GAAGTGATTA G
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Protein sequence | MDKLKGRDLL SLANLNSEEL KEILQLAAQL KSGEINLKCN KVLGLLFSKA STRTRVSFTV AMYQLGGQVI DLNPNVTQVS RGESLEDTAR VLDGYLDILA IRTFEQKDLE SFANYAKIPV INALTDREHP CQILADLLTV QENFGKLDGI TLSYFGDGNN VANSLLLGCA MVGINVRIAT PENYLPNKEI VEQAKTIANG KSEVLVTQDP QVAVKDSQVL YTDVWASMGQ EQEANNRIPI FQPYQVNEKL VESAADDVII LHCLPAHRDE EITDAVIEGK KSLVWEQAEN RMHAQKALLI SILGSD
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