Gene Tery_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1294 
Symbol 
ID4242044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1975139 
End bp1976026 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content33% 
IMG OID638106487 
Producthypothetical protein 
Protein accessionYP_721098 
Protein GI113475037 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000310204 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.331391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATT TAACAGCAAT CAAAAACCTA AAAAAAAGTT TCTCTTTTGT ACCTTTAAGG 
CAACGTTTTA ATCGAAGAAA AAAAATATCT TTTGAAGAAA AACAAAGTCA GGCATTAAAA
GATATCGGGG ATAAATTAAA AATGTTTAGA AATAAACATT CTATTTGTTT AAAAAGAGTG
GCAGTAGTGA CAATGATTAG AATTAATTTA CTAGAAGCAA TAGAAGAAGG TAATTTAAAA
GAACTGCCAG AGCCAGTTTA TATTCAAGGT ATGATTAAGC GATATGCAGA TGCTATAGGA
TTAGATGGAG AGGAACTAGC AAACTCATTT CCAACTGCAA AAGTTCAGGA AATTACGATA
AAATCTCTGC CGAATTTATC AATGCTTCAG CTACGACCAT ATCATCTTTA CTTTTTATAT
GTATTACTTG TTATTTTAGC AGTTCGTTTG TTACCTTATG TTAATAACTC TTATTATATA
TGGATACGAG ATGGTATTAC TAAGTCTGAA AAACAACAAT ATGAACGAGA AAATGAGGTT
AATGTTTTAC CTCCAGTTTC TCAGAAAAAT AGGAAAACTG AGGGAAGATC TTCAGATCAA
ACAACACAAA AGTCAGATAA ACAAAATGAT GGACAACCTG TAGTTCTCAG TGTAATTGCG
AAAGAAGAAT CTTGGGTATC AATAAAGATA GATGGAAAAG TAGCGTTTGA AGGGACTTTA
GCTCAAGGCA CTCAGAAAAC TTGGTCAGCC CAAAAGCAAC TGGTTTTTTT CGCAGGCAAT
GCTGGAGGAA TAATTATACC TATTGATAAT GGGCAAAATA TGCAACTGGG AAAACCGGGT
GAAGTCAAAG AAGTTGTTCT TACTTCTACT AACACCCAAA TACAATAA
 
Protein sequence
MVNLTAIKNL KKSFSFVPLR QRFNRRKKIS FEEKQSQALK DIGDKLKMFR NKHSICLKRV 
AVVTMIRINL LEAIEEGNLK ELPEPVYIQG MIKRYADAIG LDGEELANSF PTAKVQEITI
KSLPNLSMLQ LRPYHLYFLY VLLVILAVRL LPYVNNSYYI WIRDGITKSE KQQYERENEV
NVLPPVSQKN RKTEGRSSDQ TTQKSDKQND GQPVVLSVIA KEESWVSIKI DGKVAFEGTL
AQGTQKTWSA QKQLVFFAGN AGGIIIPIDN GQNMQLGKPG EVKEVVLTST NTQIQ