Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1276 |
Symbol | |
ID | 4245783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1958159 |
End bp | 1959787 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638106473 |
Product | arginine decarboxylase |
Protein accession | YP_721084 |
Protein GI | 113475023 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.099521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACC AAACTAAGAC ACCAATAGTT GAAACTCTTC AAAATCTCAC CCAAAAATTT CATGCCCCTT TCTATGCACC AGGGCATAAA CATGGAAAAA GCATTCCACA ATCCCTGAGT GAATTATTAG GAAAAAAAGT CTTTCCAGCA GATTTACCAG AATTACCAGA ACTAGATAAC TTATTCGCTC CAGACGGTGT AATTCAAGAA GCTCAAGAAT TAGCAGCAGA AACCTTCGGC GCATTACACA CCAGATTTAT AGTCAACGGT TCTACTTCAG GAATTATTGC CGGAATTCTA GCTACTTGTG GAAATGGAGA TAAAATAATT TTACCTCGGA ATATTCATCA ATCTGTAATC TCTGGCTTAA TTCTATCTGG AGCAATTCCG ATTTTTATCG ATCCAGAATA TGATTTAAAT TGGGATATTC CTCTCAGCAT TACTCCCGAA TCTATTACCC AAACATTAGC AAAACACCCT GATACTAAAG CAGTTATGAT AGTTTATCCT ACTTATCATG GTGTTTGTGG AAATATTAGA GCGATCGCCC AACAAGTCCA CAAATATAAT ATTCCTCTAT TAGTAGATGA AGCTCACGGA GCTCACTTTG CTTTTCATTC AGAATTGCCA ATACCAGCAT TATTAAGTGG AGCAGATTTA AGTGTACAGT CAACTCATAA AACTCTAGGA GCTATGACTC AAGCATCAAT GCTTCATGTT GGTAGTAATC GTATTGATCT TGATCGACTT GAGCAAGCAT TACAGATATT ACAGTCTAGT AGTCCCAGTT ATCTACTTCT AGCTTCTCTT GATGCTGCCA GACAACAAAT GGCTTTATTT GGTGAGGAAC TAATGAGCCA AACCCTGGAA TTAGCTAAAA ATGCTAGAAA CAGAATTAGT CAACTCTCGA ATTATTCAGT ATTCAATCTA AAAAGAAGGG AAAAGAAGAC AGAAGAAAGA AATTTTACTT GCTTATCAAA AGATTCAGAT TTATTAAAGA ATAGGGTTAA AGAAGATATT GGGGACTCAG GAGCAATATT CTCAAATCCT AATACTCAAC TTCCAACTCC CAACTACCCT CCCAATTTTC TAATTAAGAA TTATTTCAAC CCAGGATTTA TTGCTCTTGA TCTTACAAGA TTAACTATTA AAGTTTCTCA GATTGGATTC AGTGGTTATC AGGCTGATGA AATTTTACAT CAGGAATTAG GAGTTACTTG TGAGTTACCC AGTTTTCTAA ATCTGACATT TATTATTTCT CCAGGAAATA CAAAGGCAGA TATTAATCAA TTAGTAACTG GTTTGATTAG TTTAAGGCAT CGGGGTAGGA TTAATTTACC TACTAACGAT GGAACAAAAT TTGACCTTAA AGTGAATGAT TTTTCAATAC CTATTTCTCC TAGAGATGCT TTTTTTGCTC AGAAGAATTG TTTACCCATT AAAAAATCTG TAGGATATAT CAGTGCCGAA TTAATTTGTC CCTATCCACC AGGTATTCCA GTATTAATAC CTGGTGAAAT TATTACAGAA AAGCATATTC AGATACTTGA ACAAGTCCAG GCTAATGGTG GCATAATAGT AGGATGTAGT GACCCTATTC TTAAAACTAT CAAAGTCTCT AGATTTTAG
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Protein sequence | MFDQTKTPIV ETLQNLTQKF HAPFYAPGHK HGKSIPQSLS ELLGKKVFPA DLPELPELDN LFAPDGVIQE AQELAAETFG ALHTRFIVNG STSGIIAGIL ATCGNGDKII LPRNIHQSVI SGLILSGAIP IFIDPEYDLN WDIPLSITPE SITQTLAKHP DTKAVMIVYP TYHGVCGNIR AIAQQVHKYN IPLLVDEAHG AHFAFHSELP IPALLSGADL SVQSTHKTLG AMTQASMLHV GSNRIDLDRL EQALQILQSS SPSYLLLASL DAARQQMALF GEELMSQTLE LAKNARNRIS QLSNYSVFNL KRREKKTEER NFTCLSKDSD LLKNRVKEDI GDSGAIFSNP NTQLPTPNYP PNFLIKNYFN PGFIALDLTR LTIKVSQIGF SGYQADEILH QELGVTCELP SFLNLTFIIS PGNTKADINQ LVTGLISLRH RGRINLPTND GTKFDLKVND FSIPISPRDA FFAQKNCLPI KKSVGYISAE LICPYPPGIP VLIPGEIITE KHIQILEQVQ ANGGIIVGCS DPILKTIKVS RF
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