Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1247 |
Symbol | clpP |
ID | 4241725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1930923 |
End bp | 1931513 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638106456 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_721067 |
Protein GI | 113475006 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.063421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATAG GTATTCCCAG TGTTCCTTAT CGTCTTCCTG GTAGTCAGTA TGAAAGATGG ATAGATATTT ATACCCGTCT TGGTCAGGAA AGAATTATAT TTCTTGGTCA AGAAGTTACA GATGGGCTAG CTAATAGAAT TGTAGCCTAT ATGTTGTATT TGGATTCTGA CGATCCAAAT AAACCCATTT ATCTTTATAT AAACTCTCCT GGTGGTTCTG TCACAGCAGG ATTGGCGATA TACGATACTA TGCAGTATAT CAAAGCAGAT GTTATTACTA TCTGTTTGGG TTTAGCAGCT TCAATGGGTT CATTTTTATT AGCTGCTGGA ACTAAAGGTA AAAGATTGGC CTTGCCTAAC TCTAGAATTA TGATTCACCA ACCAATGGGA GGTACTCGCG GTCAAGCTAC AGATATTGAG ATTGAAGCTA ACGAAATTCT GCGGGTTAGA TCGGAATTAA ATAATATGTT GGCAGAGCGT ACAGGTCAAT CTTTGGAAAA GATAGAAAAA GATACTGACC GTGATTATTA TATGTCTGCT GAAGAAGCTA AAGAATATGG TTTAATTGAC CAGGTAATTG AAGAACGTTA A
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Protein sequence | MPIGIPSVPY RLPGSQYERW IDIYTRLGQE RIIFLGQEVT DGLANRIVAY MLYLDSDDPN KPIYLYINSP GGSVTAGLAI YDTMQYIKAD VITICLGLAA SMGSFLLAAG TKGKRLALPN SRIMIHQPMG GTRGQATDIE IEANEILRVR SELNNMLAER TGQSLEKIEK DTDRDYYMSA EEAKEYGLID QVIEER
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