Gene Tery_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1247 
SymbolclpP 
ID4241725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1930923 
End bp1931513 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content37% 
IMG OID638106456 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionYP_721067 
Protein GI113475006 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.063421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATAG GTATTCCCAG TGTTCCTTAT CGTCTTCCTG GTAGTCAGTA TGAAAGATGG 
ATAGATATTT ATACCCGTCT TGGTCAGGAA AGAATTATAT TTCTTGGTCA AGAAGTTACA
GATGGGCTAG CTAATAGAAT TGTAGCCTAT ATGTTGTATT TGGATTCTGA CGATCCAAAT
AAACCCATTT ATCTTTATAT AAACTCTCCT GGTGGTTCTG TCACAGCAGG ATTGGCGATA
TACGATACTA TGCAGTATAT CAAAGCAGAT GTTATTACTA TCTGTTTGGG TTTAGCAGCT
TCAATGGGTT CATTTTTATT AGCTGCTGGA ACTAAAGGTA AAAGATTGGC CTTGCCTAAC
TCTAGAATTA TGATTCACCA ACCAATGGGA GGTACTCGCG GTCAAGCTAC AGATATTGAG
ATTGAAGCTA ACGAAATTCT GCGGGTTAGA TCGGAATTAA ATAATATGTT GGCAGAGCGT
ACAGGTCAAT CTTTGGAAAA GATAGAAAAA GATACTGACC GTGATTATTA TATGTCTGCT
GAAGAAGCTA AAGAATATGG TTTAATTGAC CAGGTAATTG AAGAACGTTA A
 
Protein sequence
MPIGIPSVPY RLPGSQYERW IDIYTRLGQE RIIFLGQEVT DGLANRIVAY MLYLDSDDPN 
KPIYLYINSP GGSVTAGLAI YDTMQYIKAD VITICLGLAA SMGSFLLAAG TKGKRLALPN
SRIMIHQPMG GTRGQATDIE IEANEILRVR SELNNMLAER TGQSLEKIEK DTDRDYYMSA
EEAKEYGLID QVIEER