| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1230 |
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| Symbol | |
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| ID | 4242157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1904238 |
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| End bp | 1905296 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638106443 |
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| Product | photosystem II D2 protein (photosystem q(a) protein) |
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| Protein accession | YP_721054 |
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| Protein GI | 113474993 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000683761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGTAG CAGTCGGACG CCCACAATCT CAAAGAGGAG CATTTGATGT CCTCGATGAC
TGGCTAAAAC GCGATCGCTT TGTATTCGTT GGTTGGTCTG GTATACTTCT CTTCCCATGT
GCTTTCTTGT CCATTGGAGG ATGGTTAACT GGGACTACCT TCGTCACTTC CTGGTATACC
CACGGGTTAG CCAGTTCTTA CCTAGAAGGA TGTAATTTTC TAACAGTTGC AATTAGCAGC
CCAGCTTATA GCATGGGACA TTCCCTACTC TTCCTTTGGG GCCCAGAGGC TCAGTGGGAC
TTTGCCCGTT GGTGTCAAAT CGGTGGTCTC TGGTCATTCA CTGCCCTACA CGGTGCATTT
GCTCTAATTG GATTCTGCCT ACGTCAGATT GAAATTGCTC GTTTGGTTGG AATACGTCCT
TACAATGCTA TTGCCTTCAC AGGACCAATT GCAGTATTTG TAAGTGTATT TTTAATGTAC
CCATTGGGTC AATCAAGCTG GTTCTTTGCA CCTAGTTTTG GTGTAGCTGG TATATTCAGA
TTTATCCTAT TTTTACAAGG ATTCCATAAC TGGACACTCA ACCCATTTCA TATGATGGGT
GTAGCAGGAA TCTTGGGTGG TGCACTTTTG TGTGCTATTC ATGGTGCTAC AGTAGAAAAC
ACACTTTTCC AAGATGGAGA GGCAGCAAAT ACCTTCCGCG CATTTGAGCC TACTCAATCT
GAAGAAACAT ATTCAATGGT GACAGCTAAT CGTTTCTGGT CCCAAATTTT CGGTATTGCA
TTTTCCAACA AACGTTGGTT ACACTTCTTC ATGTTATTTG TACCAGTAAC AGGATTGTGG
ATGAGTTCCA TAGGTATAGT GGGTTTAGCA TTCAACCTAC GAGCTTATGA CTTTGTATCT
CAAGAGTTAC GGGCAGCAGA TGACCCAGAA TTTGAAACAT TTTATACCAA AAATATCTTG
CTAAATGAAG GTATCCGAGC TTGGATGTCT CCTGCAGACC AACCACATCA AAACTTTATG
TTCCCAGAGG AAGTACTACC TCGTGGTAAC GCTCTTTAA
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| Protein sequence | MTVAVGRPQS QRGAFDVLDD WLKRDRFVFV GWSGILLFPC AFLSIGGWLT GTTFVTSWYT
HGLASSYLEG CNFLTVAISS PAYSMGHSLL FLWGPEAQWD FARWCQIGGL WSFTALHGAF
ALIGFCLRQI EIARLVGIRP YNAIAFTGPI AVFVSVFLMY PLGQSSWFFA PSFGVAGIFR
FILFLQGFHN WTLNPFHMMG VAGILGGALL CAIHGATVEN TLFQDGEAAN TFRAFEPTQS
EETYSMVTAN RFWSQIFGIA FSNKRWLHFF MLFVPVTGLW MSSIGIVGLA FNLRAYDFVS
QELRAADDPE FETFYTKNIL LNEGIRAWMS PADQPHQNFM FPEEVLPRGN AL
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