| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1195 |
|---|
| Symbol | |
|---|
| ID | 4242538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1869679 |
|---|
| End bp | 1870758 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638106413 |
|---|
| Product | PilT protein-like |
|---|
| Protein accession | YP_721025 |
|---|
| Protein GI | 113474964 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0130312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACG CACTTATTAT TATTTCATTT GTATTTGCTG GAGCGGGAAT AGGTTTCTAT
AGCATAGAAC TACTTCCACC TAACGTATTG CTAGAAGTCA CTAACATCGA AGGTTTACGT
TCAGTATTAT CTGCCTTCAC TTCTTTAATT GGGTTTGTAG TGGGATTAGT ATTTCAAACT
ACATATCGCC GAGTAGAAAT TAAATTCAGA CAAATGCCTG TAGACTTATT ATTAACTCGG
GCGATAGGAT TAATAATTGG ACTATTAGTG GCCAACTTAA TGCTGGCGCC ACTGTTTTTA
CTTCCTATTC CCGATGAGTT TAGTTTCATT AAACCTCTTG TGGCAGTTTT AGCTAGTGTG
ATGTTAGGTT TTACTGGAGT TAATGTTGCT GATACTCATG GTCGTGGTTT TTTACGATTA
ATTAATCCTA ACAGTCTGGA TGCAGTATTA GTAGCTGAAG GTACTCTCAA ACCTTCTACT
ACTAAGATTT TGGATACTAG CTGTATTATT GATGGTAGAA TAGAAAGTCT GTTGAAGACA
GGTTTTTTGG AGGGTCAAAT TCTGGTACCA AACTTTGTTT TACAGGAGTT ACAGCTTATT
GCTGATGCTT CTAATGATCA AAAAAGAGTC AGAGGTAGAC GAGGGTTAGA TATTTTAAAT
AGACTTAAAG AGCTTTATCC TTCTCAAATT CAAATCCATT TTGCAGACTA TGAAGAAATT
CCTACTGTGG ATGCGAAGTT GGTTCGTTTT GCTCTGGAAA TTAATGGTAC TTTGTTGACG
AATGATTACA ATTTATCTAA GGTTGCTAGT TTACAAAAGG TTCCTGTTCT CAATATTAAC
GACTTGACTC AAGCAGTAAG ACCAAGTTAT TTGCCTGGTG ATACTATTGA AATCAAAATT
CGTAAGGAAG GTAAAGAACC TTCTCAGGGT ATTGGCTATT TAGATGATGG TACAATGGTT
GTTGTGGAGT CTGGTAGTGG ATATGTTGGT GATGAGGTGC GGGTTATTGT GACCAGTTCT
TTACAAACTT CTGCGGGTAG GATGATTTTT GCTCGTACTC AAGAGTCAGC GATCGCTTAA
|
|---|
| Protein sequence | MLDALIIISF VFAGAGIGFY SIELLPPNVL LEVTNIEGLR SVLSAFTSLI GFVVGLVFQT
TYRRVEIKFR QMPVDLLLTR AIGLIIGLLV ANLMLAPLFL LPIPDEFSFI KPLVAVLASV
MLGFTGVNVA DTHGRGFLRL INPNSLDAVL VAEGTLKPST TKILDTSCII DGRIESLLKT
GFLEGQILVP NFVLQELQLI ADASNDQKRV RGRRGLDILN RLKELYPSQI QIHFADYEEI
PTVDAKLVRF ALEINGTLLT NDYNLSKVAS LQKVPVLNIN DLTQAVRPSY LPGDTIEIKI
RKEGKEPSQG IGYLDDGTMV VVESGSGYVG DEVRVIVTSS LQTSAGRMIF ARTQESAIA
|
|---|
| |