| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1163 |
|---|
| Symbol | |
|---|
| ID | 4245746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1823465 |
|---|
| End bp | 1824130 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638106385 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720997 |
|---|
| Protein GI | 113474936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000227012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTC CTTTACCCCA GTTTGCTAAT ACAAATCACC AAAATAATTA CATAGCTGAA
GTGATAGAAA CGGCAACTAC AGAGTTTTTA GCTCAATGTT TAGAACCAAA AGAATTAGAT
TTTCCTATGA TGCCTGCTTT TGGTACTTGG GTAAAGTCTC AAGATGAACA ATCACAAAAT
ATGATTTATG GGGTAGTTTA TTATGCTACT ACTTTGCCGG TTGATTCTGT ACATAGAGCT
AGAGCTTTAG GAATGTCTCT ACCTGAATTA AGGGAGCAAC AACCGCAAAT TTTCGCTATG
TTAAAGACAG AGTTTCGAGC AGCAATAGTC GGTTTTTCTT CCCCAGAAAA TTTGAATGGT
TCTCAAACAG AAAATGGTAG GATTTATCAG TATATTCCAC CTCGTCCACC TCAAATTCAT
CAGGGAGTCT ATTTATGTGA ACCGAAAGAA ATAATTAGGT TTAGTGATCA GTTAGATTTT
TTACGGACAT TGTTACAGTT AAGTAATGCT CCTGTTGATG CTTTGGTTGC AGCTACTATT
CGAGAAATTT ATCAACTCAG AAAAGCGGAT CGTAATTGGT TAGTTCAAGC AGGTAGAAAT
ATGAGTGTTC TACTTAGAGA TGATTATGAT CGCTTAAAAA TAATTTTAGG CCAAATACAC
CCTTAA
|
|---|
| Protein sequence | MRLPLPQFAN TNHQNNYIAE VIETATTEFL AQCLEPKELD FPMMPAFGTW VKSQDEQSQN
MIYGVVYYAT TLPVDSVHRA RALGMSLPEL REQQPQIFAM LKTEFRAAIV GFSSPENLNG
SQTENGRIYQ YIPPRPPQIH QGVYLCEPKE IIRFSDQLDF LRTLLQLSNA PVDALVAATI
REIYQLRKAD RNWLVQAGRN MSVLLRDDYD RLKIILGQIH P
|
|---|
| |