| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1154 |
|---|
| Symbol | |
|---|
| ID | 4245737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1812931 |
|---|
| End bp | 1813464 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638106377 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720989 |
|---|
| Protein GI | 113474928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00194031 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00507704 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATAATT CTCTATTTTG GTTAGGACTG TCCTTATTCT TAGTGGCATT TAGCCTGACA
ACTGTATTAA TTGTTACTTT ACCTGCAATG TTGGCATTAG CAAGGGCAGC TCGTAGTATA
GAAAAACTAG CTGATATCCT GGCTCGTGAA CTACCATCAA CCCTAGAAGC AATTCGTCTT
ACTGGTATAG AAATTAGTGA GCTAACTGAT GATATAAATG ATAGTGTTCA AACTGCAGGA
GAAATAGTCA AACAAGTCGA TCAAAAAATC AGTCATGTTC GTAAACAAAC TAAGCAAGTT
AAAACTACCA CAAATAGTAT TTTTACTGGT ATTAAAGTAG CTTGGAAAAC TTTTAGTTGT
CAACAACAAG GAAAAAAAAA TACGAGGAAG CAGTTAAAGC ATCTTTCACC ATATTCTGAC
AAAAATAATA GTCAGAATAA TTTTCTCAGC AAAGATATTA CTCCTATCTC GGAAACTAAA
GACTCTAATC TAAATTCAGA GTCCTCAACA AAACAAAAGA CTGATAGAAA ATAA
|
|---|
| Protein sequence | MNNSLFWLGL SLFLVAFSLT TVLIVTLPAM LALARAARSI EKLADILARE LPSTLEAIRL
TGIEISELTD DINDSVQTAG EIVKQVDQKI SHVRKQTKQV KTTTNSIFTG IKVAWKTFSC
QQQGKKNTRK QLKHLSPYSD KNNSQNNFLS KDITPISETK DSNLNSESST KQKTDRK
|
|---|
| |