Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1152 |
Symbol | |
ID | 4245735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1811022 |
End bp | 1811618 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638106375 |
Product | hypothetical protein |
Protein accession | YP_720987 |
Protein GI | 113474926 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.450592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00560456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAATC TATCTCAGCA AAAAATTTTT AAATTACTAA TTATATTTAC TTCTGTACTG TTTTTTTCAT TGCTGTTGCT TACTCGTATT CCTGGAATGG AAATTTTAGG AATTGGACCT AACTGGTTAT TAATTTGGTT AGTGACTTGG AGTAGTCATA GCTCCATTAT AGGAGGTTTA GTAGCTGGCT TAATTTTAGG ATTAATTCAA GATGCAATGA CAGCTCCCTA TCCTACTCAT ATTATTTCTT TAGTTTTTGT TGGATTTTTT ACAGCTTTTT TACAAAAAAA ACGCTACATA CAGGAAGATT TTATTTCTAT AGCCTTAGTG ACATTTATTA TGGCTATTAT TACTGAAACT TTCATCGCAA TTCAGTTTGG GTTAATGGGT AATCAAAGCT TTGCAGAAGT TTGGATTCAC TATAAGCAAG TTGCCTTGGG TTCTGCTGTT ATTAGTAGTC TTTGGGCTCC GGTTTTGTAT TTTCCTTTTA GTCAATTTTG GAAGGTAAAA AAAAATAACT ACTATAATTT CAGTTCTCAC TTAGGAGTAC ATCCAGCTTT AGCTTATAGC CAGAAAATCC TTGAATTTTT GGGTTAA
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Protein sequence | MSNLSQQKIF KLLIIFTSVL FFSLLLLTRI PGMEILGIGP NWLLIWLVTW SSHSSIIGGL VAGLILGLIQ DAMTAPYPTH IISLVFVGFF TAFLQKKRYI QEDFISIALV TFIMAIITET FIAIQFGLMG NQSFAEVWIH YKQVALGSAV ISSLWAPVLY FPFSQFWKVK KNNYYNFSSH LGVHPALAYS QKILEFLG
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