Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1122 |
Symbol | |
ID | 4242854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1764326 |
End bp | 1765177 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638106345 |
Product | abortive infection protein |
Protein accession | YP_720957 |
Protein GI | 113474896 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.90846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0094242 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCTAATT TATTATTACT TCAGAAAATA GCGGAGTTTT CTGCTCCTAC AAGAATTGTA ATTTTTCTGA GCATATTACT TTTGGTTTGG ATGCCACTGG CAATACCAAT CTATTTTTTG GTCGAAGATG TTAATCTACA GAGTATATGG ACAATAACTC TTCTATACAT TGAGTTTATT ATTTTAGTCA GGTTATGGGG AAAGAAAGTA TATCAGCAAC CCCATCTATT ATGTGACTAC GGTTTAATAA TAAATAGACG TAATTTTCAA CTGTTTTTTC AAGGTTTAGG AATAGGTTTA TTTTGTCTAT TTAGTTTGTT GATATTAGAG ATGTTTTTGG GATGGTTAGT ATGGCTTTCA CCCCCAGAAG ATTTACTAAA ATTTATCTTT GAAGGTTTAT TAGTTTCTGT AGGTATTGGT TTTGCTGAAG AGTTATTATT TAGGGGTTGG TTGTTAGATG AGTTGGAGAG AAATTATCAA TCAACAATAG TTTTATGGGT GAGTAGTATT GTTTATGCAG TACTACATTT TATTAAACCT ATAGAAGAAA TTTGGCGGAC TTTGTTACAA TTTCCGGGTT TAGTTTTATT GGGTTTAATA TTTGTTTGGG CAAAACGTAG TAGTGGGAAA AAGTTGAACA AATTTACTAA TAAGAAAGAA GAGTTATTGG GTTTTCCTAT GGGTATTCAT GCTGGTTTAG TATGGGGATA TTATATTGTT AATGTGAGTG GTTTAGTTAA ATATGATGAT GGGGTTGGAG ATTGGTTAAT TGGAATAGAT GGTAATCCTT TAATGGGTTT AATGGGGTTG TTATTTTTAG GAGTGATAGC TTTTGGGGTG AGAAGAAGTT GA
|
Protein sequence | MSNLLLLQKI AEFSAPTRIV IFLSILLLVW MPLAIPIYFL VEDVNLQSIW TITLLYIEFI ILVRLWGKKV YQQPHLLCDY GLIINRRNFQ LFFQGLGIGL FCLFSLLILE MFLGWLVWLS PPEDLLKFIF EGLLVSVGIG FAEELLFRGW LLDELERNYQ STIVLWVSSI VYAVLHFIKP IEEIWRTLLQ FPGLVLLGLI FVWAKRSSGK KLNKFTNKKE ELLGFPMGIH AGLVWGYYIV NVSGLVKYDD GVGDWLIGID GNPLMGLMGL LFLGVIAFGV RRS
|
| |