| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1098 |
|---|
| Symbol | |
|---|
| ID | 4242179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 1726892 |
|---|
| End bp | 1727728 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 638106324 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_720936 |
|---|
| Protein GI | 113474875 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0504909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATC TATTATTTTG TTTTGATCAA AACTATCAAC AACACTTCGG TGTAGCAATC
ACTTCTGTAT TATTAAATAA TTTATCTAGT CATTTTGATG TACATATAAT CACAAATTTT
ATGGAAGAAA AACTAAAACA AAAATTAGAT ACGCTGAGTA AAAATTATAA ATGTTCATTT
CATTTATATA TAATCAATAA CCTTGATAAA ATTAGCAAAT TAAAAGTATC TGATCATGTT
TCCAATGCAA CTTATTATAG ATTAATAATG GCTGAAATTC TCCCTAAGCA TATAGATAAA
GTTCTTTATT TAGATTCTGA TGTTGTTGTA ATTTCTCCCT TAGAAGAACT ATATAATATT
GATCTAGAAA ATTACTTTAT TGCTGCTTCA GGATTTTCTG GCACTTTGGT AAAAAGTAAA
GGTTTTAATA GTGGTGTTAT GGTTGTTAAC TTAGAAAAAT GGAGAAATGA ACAAATTTCA
ACAAAAGTAA TTGATTTTGC AACTAAAAAT AGAGATAAGC TGCCATACCA CGACCAAAGC
GCTTTAAATC GTGTAATCAA ACAGAATTAC TTAATAATTG ATCGGAAATG GAATTTTCAA
GTGGACTTAA GCCCAAGAAA AATTCAAAAA CCTGATGACA ATATCGCTTT GAAAAATGCT
AGAATTATAC ATTATATTGG TTCTTCAAAA CCTTGGTATT TTTGGATATC TGATCAACGG
AAAAATATAT ATGAATTATA TTTAAAAAAA TCATTGTGGT CTACATCCAA ATTACAGATG
ATTTTCCAGC AAACTGTATA TTTTCGAAAA GCCTTACAGA GAAAACTTAA GAAATAA
|
|---|
| Protein sequence | MMNLLFCFDQ NYQQHFGVAI TSVLLNNLSS HFDVHIITNF MEEKLKQKLD TLSKNYKCSF
HLYIINNLDK ISKLKVSDHV SNATYYRLIM AEILPKHIDK VLYLDSDVVV ISPLEELYNI
DLENYFIAAS GFSGTLVKSK GFNSGVMVVN LEKWRNEQIS TKVIDFATKN RDKLPYHDQS
ALNRVIKQNY LIIDRKWNFQ VDLSPRKIQK PDDNIALKNA RIIHYIGSSK PWYFWISDQR
KNIYELYLKK SLWSTSKLQM IFQQTVYFRK ALQRKLKK
|
|---|
| |